Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02605 ATGGGGAGTGAGGGTGCAGCAGTGTGGCAGGGTGCGTTTTTAGGTGGAATACTTTTCTGGCTTGTTTCTGCTTCATACCTCGACGTTACTCGCAAGCTTAGATCTTTCTTTCAACCTTGGGTTTCTCATCATGTTGACACTCAAACCCCTATTATCCTCAAGATCCAGAGTTACGGGTTTGGGTTCTTGGATGCACTTTTCTCCGGGTTGTCTTGCGTTGTTTCGGTGCCCTTCTACACTGGTTTTCTCCCTCTGCTATTCTGGAGTGGACATGGCAAATTGGCGAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATCTTGGTAACTGTATAAAGGATGTGATTTCAGCTCCAAGACCTGCTTCTCCACCTGTCAAGAGAGTAACTGCCACAAAAGATGAAGAAGAGAATGCGTTAGAATATGGATTGCCTTCTTCTCACACACTTAACACAGTTTGCTTATCTGGCTACCTTCTGCACTATGTCCTCACTCATACTCAAATTCAAGGTTCCTATGTTACTTACCTTGGAGTTTCTCTTGCCTTGATTCTGGTGTTTCTCATTGGTTTCGGAAGAATTTATCTTGGCATGCATAGTGTGGTTGATGTTCTTGCTGGCCTTCTTATTGGATTTGTGGTCCTTGCATTTTGGCTTACTGTTCATGAACACATAGACAGTTTTGTAATCTCAGGACAAAATGTTACATCCTTTTGGGCTATCTTGAGCTTCCTCTTGCTTTTTGCTTATCCTACACCTGAACTTCCAACTCCAAGCTTTGAGTTTCACTCTGCATTCAATGGTGTTGCATTAGGAATTGTTGCCGGAGTACAGCAAACATACCATCAATTTCACCATGGCGACGTTCCTCGTTTGTTCTCTTCAGAACTGACTCTGCCTGTATTTGCGGGAAGGATGCTGGTTGGCATACCCACAATTCTAACTGTGAAATTCTGCAGCAAGGCTCTTGCAAAATGGACCATTCCTATGGTAGCAAACACCTTGGGCATCCCAATAAAATCAACCAGCTATATACCCACATTGAATGGATCTGCAATGGGGAAAAAGACTGATAAGCTTAAACAAGGTTACTTGCAAAAGCTCCTTTCTCGGCGCAAGGTATTCGATGTGGATACCGGAATTAGATTTCTTCAGTATACAGGCCTTGCCTGGTCTGTAGTTGACCTAGTGCCATCGCTTTTTTCATACATGAGTTTGTGA 1221 0.4357 MGSEGAAVWQGAFLGGILFWLVSASYLDVTRKLRSFFQPWVSHHVDTQTPIILKIQSYGFGFLDALFSGLSCVVSVPFYTGFLPLLFWSGHGKLARQMTLLMAFCDYLGNCIKDVISAPRPASPPVKRVTATKDEEENALEYGLPSSHTLNTVCLSGYLLHYVLTHTQIQGSYVTYLGVSLALILVFLIGFGRIYLGMHSVVDVLAGLLIGFVVLAFWLTVHEHIDSFVISGQNVTSFWAILSFLLLFAYPTPELPTPSFEFHSAFNGVALGIVAGVQQTYHQFHHGDVPRLFSSELTLPVFAGRMLVGIPTILTVKFCSKALAKWTIPMVANTLGIPIKSTSYIPTLNGSAMGKKTDKLKQGYLQKLLSRRKVFDVDTGIRFLQYTGLAWSVVDLVPSLFSYMSL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02605 406 Pfam PAP2 superfamily 98 222 IPR000326 -
Spst1g02605 406 SMART acid_phosph_2 95 219 IPR000326 -
Spst1g02605 406 CDD PAP2_SPPase1 62 219 - -
Spst1g02605 406 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 38 227 IPR036938 -
Spst1g02605 406 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 39 234 - -
Spst1g02605 406 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 19 338 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02605 - - gmx:100807865 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02605 1 34491231 34496459 Spst1g02605 1 34491231 34496459 ECH