Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02599 ATGATGCTCAGACTTCGAAGCCGCGACGGCGTGGAGCGAGTCATCGTCGAAAACCCGCACACCACCACAGTGTCCGAGCTCAAACGGATCATCGAAGCCCAATTGAGAATTCCGGTTCACAACCAAACCCTCTCGACCAACCAGAACCTTCTATTAGCGAAATCGCTTGAAGATCTCCATCGATTCACGGATATGTCCAACCCCGATGCCACTCTGGCTTCTCTGAACCTCGTTCACGGCTCCATCGTCTTTTTGACCTACGAAGGTGAGCGACACGTACCCGGCCCCGCCTTCAACCCCGCGGGCTCTTTTGGCCGCAAGATGACCATGGACGACCTCATCGCCAAGCAGATGCGCGTCACGCGCCAGGAGAATCCGCACTGCGAGCTCGTCTCCTTCGACCGCGACTGCGCCAACGCGTTCCAGCACTATGTGAACGACACGCTCGCGTTCGCTGTCAAGCGCGGCGGCTTCATGTACGGCACCGTTTCCGAGGAGGGGAAGGTCGAGGTGGACTTCATCTACGAACCGCCGCAGCAGGGTTCGGAGGAGAATCTCGTCTTTTTCAGGGACCCCGAAGAGGAGAAACTCGTGGAGGCTATTGCGGCGGGGTTGGGGATGAGGAGGGTTGGGTTCATTTTCACGCAGACGATAAGCCAGGACAAGAAGGATTATACTTTGTCGAATAGGGAGGTGCTTCAAGCTGCGGAGTACCATGCTGAGAGTGGGTTGAAGGAATGGGTTACTGCGGTTGTTAAGCTTGAGGTGAATGAGGATATGAGTGCGGATGTGCATTTTGAAGCGTTTCAGATTAGTGATGTGTGCGTGAGGTTGTTCAAGGAAGGTTGGTTTCAGACTGAGATAAAGGAGGACGATGATCCCAAGTTATCGAAGATGAAGAAGGATGTGGTTGTTGGGGTTAAGGATACTAAAGAGGTTGATAATGATTTCTTCTTGGTCGTCGTCAAAATCTCTGATCATCAGGGTCCTCTTTCATCATCATTTCCCATTGAGAACCGGAACAGGGACACTCAAATGACTATGAAGGCTTTGAAGAATCATCTGGACAGGACAAAAAATCTTCCATTTGTGAAGCGAATTTCTGATTTTCATCTTCTTCTTGTATTGGCAAGGGTTTTAGACCTGAATGCTGATGTTCCTGCATTGACGGAATGTGTGCAGACACAGACTTCTATACCAGAAGGTTACCAGATCCTTATTGAGTCTATGGCAAACACAGCTTGA 1245 0.5076 MMLRLRSRDGVERVIVENPHTTTVSELKRIIEAQLRIPVHNQTLSTNQNLLLAKSLEDLHRFTDMSNPDATLASLNLVHGSIVFLTYEGERHVPGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEENLVFFRDPEEEKLVEAIAAGLGMRRVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMSADVHFEAFQISDVCVRLFKEGWFQTEIKEDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSSFPIENRNRDTQMTMKALKNHLDRTKNLPFVKRISDFHLLLVLARVLDLNADVPALTECVQTQTSIPEGYQILIESMANTA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02599 414 FunFam NPL4-like protein 1 1 100 - -
Spst1g02599 414 ProSiteProfiles Ubiquitin domain profile. 1 85 IPR000626 GO:0005515
Spst1g02599 414 Pfam Nuclear pore localisation protein NPL4 1 86 IPR024682 -
Spst1g02599 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 88 IPR016563 GO:0006511
Spst1g02599 414 SUPERFAMILY Ubiquitin-like 1 89 IPR029071 -
Spst1g02599 414 CDD Ubl_AtNPL4_like 1 86 - -
Spst1g02599 414 CDD MPN_NPL4 119 376 IPR007717 -
Spst1g02599 414 Pfam NPL4 family 157 282 IPR007717 -
Spst1g02599 414 Gene3D - 1 100 - -
Spst1g02599 414 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02599 K14015 - gmx:100811623 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02599 1 34446353 34449454 Spst1g02599 1 34446353 34449454 ECH