Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02587 ATGAAGAAGGAAGAGAAAGTGCAGAGAGTGATAATCGTCGGAGCAGGCCCTTCAGGTCTCTCCGCCGCCGCATGTTTCACGAAGCATTCAATTCCGTACATAATCCTTGAGAGAGAAGATTGTTTCGCTTCTCTCTGGAAGAAATACTCCTACGACCGTCTCCACCTGCACCTCAGAAAGCAGTTCTGCCAGCTTCCCCACAAGCCATTCCCACCCTCTTTCCCTCCCTACGTTCCCAAGAACCAGTTCCTCCAGTACCTCGACGACTACGTCTCCCACTTCGCCATCGCACCGCTCTATCGGAGGACGGTGGAGCTCGCCCAGTACGACGCCTCCAGCTGCCGCTGGAGGGTGGAGGCCCGGAACGGGGACTCCGGCGAGGTGGAGGAGTACTGCGGAAGGTTCCTGGTGGTTGCTACTGGGGAAACTAGCGACCCTTTTGTGCCGGAGGTGGAAGGGTTGAGTAGCTTCCCTGGGAAGGTGATCCATTCCACCGGGTTTGCGTCTGGGAAGGAGTTCAAAGATGAGCATGTTCTTGTTGTCGGGTCTGGGAATTCTGGCATGGAAATCGCCTTGGACCTTGTCAACCATGGTGCCAAAACCTCCATTCTCGTCCGAAGCCCGGTTCATTTTCTGTCAAGGGAAATGGTGAGTTGGGGGTTGTTTCTGCAGAAGTATTTGTCGTTGAGCTTTGTGGACTCGTTGATGGTGATACTTAGCACCATGTTTTATGGTGATGTGACCAAATATGGAGTCAGAAGACCCAATGAGGGTCCCTTTTACATGAAGGTCAAGTATGGAAAGTATCCAGTTATTGACGTTGGAACCTATGAAAAAATCAAGTCTGGAGAATTGAAGGTTTTGGCAGCAGAAATAGAAAGCGTGAGAGGCAAGGATGTCCTGTTCAAGAACGGTGAGTTGCACCCATTTGACTCCATTGTTTTCTGCACCGGCTTCAAGAGATCAACCAACAAGTGGCTCAAGGGAGATGATTACCTTCTCAATGATGATGGTCTTCCAAAGCCCAGTTACCCCATCCATTGGAAAGGAAACAATGGTTTGTACTGTGTTGGCCTGTCAAGAAGAGGCTTCTATGGCGCTGGTGCAGATGCTCAAAATATAGCAAATCATATAAGCTCTTTCACGCAACCTTGA 1155 0.503 MKKEEKVQRVIIVGAGPSGLSAAACFTKHSIPYIILEREDCFASLWKKYSYDRLHLHLRKQFCQLPHKPFPPSFPPYVPKNQFLQYLDDYVSHFAIAPLYRRTVELAQYDASSCRWRVEARNGDSGEVEEYCGRFLVVATGETSDPFVPEVEGLSSFPGKVIHSTGFASGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSREMVSWGLFLQKYLSLSFVDSLMVILSTMFYGDVTKYGVRRPNEGPFYMKVKYGKYPVIDVGTYEKIKSGELKVLAAEIESVRGKDVLFKNGELHPFDSIVFCTGFKRSTNKWLKGDDYLLNDDGLPKPSYPIHWKGNNGLYCVGLSRRGFYGAGADAQNIANHISSFTQP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02587 384 SUPERFAMILY FAD/NAD(P)-binding domain 7 280 IPR036188 -
Spst1g02587 384 PIRSF FMO 6 362 IPR000960 GO:0050660|GO:0050661
Spst1g02587 384 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 380 - -
Spst1g02587 384 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Spst1g02587 384 Pfam Pyridine nucleotide-disulphide oxidoreductase 11 208 - -
Spst1g02587 384 Gene3D - 1 383 IPR036188 -
Spst1g02587 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Spst1g02587 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 9 31 - -
Spst1g02587 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Spst1g02587 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02587 Spst-Chr1 34380996 34384090 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02587 K11816 - gmx:102668138 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02587 1 34380996 34384090 Spst1g02587 1 34380996 34384090 ECH