Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02586 ATGGAAGAGGAGCCGCACAAAACGGGTGTACGTGAAAGGCGTGGACCAAATGGGGACGAGATTTGGGAAGTGGGGGTGGAAGGGAATCTCATGATTCGCGTTGCACGGCTGGATCTGAAGGGATGGGGGAGGATACGCTACTTTAAGACATTTTATGGACCACTGTTAAAGAGGACCACTGATTCAAGGACTACACTCTCAAACTCCGTTAACCTTTGTCTGTGGGGGACCAATTCTGGCGACATTGACTTTTCTGGTAGCCACTTAACATGGGACCTGGCGGACCAGGGGGTCCTGGGCCTGGGGGTGGGGGTGGGCCTGGTGGCCCTGGTTGGGGCCCAGGCCCTGGTGGCCCTGGATGGGGTCCTGGCCCTGGTGGACCTGGTTGGGGTCCGGGCCCTGGTGGCCCCGGTTGGGGTCCGGGCCCTGGTGGCCCTGGTTGGGGTCCTGGAGGACCGGGCTTCTTTGGGCCTGGTGGGTTTTTTGGTGGGTGTGCTGATGGTATATGCGGCCTTTTATCTTCATGCTTCTACTGCTTGTGCTGTTGTTGGTTGTTCCAAGATTGTTTCTTCGGGCGACGCGGCCCAGGCCCAGGCATGCCGCCTCCATATTGACAAGAAGCCCACGAATTTGTCGAGCTATGTAACTGCACGCGCTCACTCACAGCGCAGAGCCAAACAAAGATTCAGATTTGAGAGTGTTTTTGGTGGAATAACGTGGAGAAGAACAATGAAGAAGGAGAATATGGCTGAGAACATGAAGAATCAACCTTCACTGTGGTGGTGGCTTGATAGCCACATTACTACTAATCGATCCCCATGGCTTCAATCCACTCTCTCTGAGCTAAATGAGAAGACAAGGGCAATGCTAAAGTTGATTGAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAGCTTGTGAGCATGGTTGAGGATTTATACAGGACACACCGCTCCTTAGCTGAGCGCTATGATCAAGTCAAACCTGATACTACTGGAATTGGACACATCGTTACTGGGGGGTCACCTTTTGCCGCAGCCAAGTATCAGATAGAGAAGTTGATGACTTTTTCAGATACTGGATACGACACCTATTCTGAGCATTGTGATGTGTACGAGTCTGAGGAATCTGAAGTTGATGATCCTGAGCAGGAGGATGAAGAAGAGGAAGAGGGGACCGACTTTCTTCACAATTGCACACAAAAGGAGCAAGCTTCATTATTGGTTGTGAGTGATGAAGTGATGAAGCTTAGGGATGAAGTCAGGAGACTCAATGAAGAGAACAAGGATCATAGGGATCAAATCAAGGAGAAGAATACCATCTGTGATGAAGTGATGATGTTGAGGGAAGAAATAGAAAGGCTTAGAGATGAGAATGAGACACAGAAGGAACAACTCAAACAGAAGGATGAAGCGAAGATAGAGGTGATAAGACAATTGAGCTTAGCAATAGATGTTCTGAAGCAAGAGAATGTGAAGATGAGAAACTTCATTGCTAAGGAGTCTACCAACAAATGGAAGAAACCATTTGATGAGATCAACAAACTTGTGGGAGAATTTTCGATGAAATTGTTCAATGGTGCTCCGAAGAATCAGCCCAGCGTTGAGCTCTCCAGATGTGGTTTAAAAAGTTTTGCAAATAATTGA 1671 0.4853 MEEEPHKTGVRERRGPNGDEIWEVGVEGNLMIRVARLDLKGWGRIRYFKTFYGPLLKRTTDSRTTLSNSVNLCLWGTNSGDIDFSGSHLTWDLADQGVLGLGVGVGLVALVGAQALVALDGVLALVDLVGVRALVAPVGVRALVALVGVLEDRASLGLVGFLVGVLMVYAAFYLHASTACAVVGCSKIVSSGDAAQAQACRLHIDKKPTNLSSYVTARAHSQRRAKQRFRFESVFGGITWRRTMKKENMAENMKNQPSLWWWLDSHITTNRSPWLQSTLSELNEKTRAMLKLIEEDADSFAKRAEMYYKKRPELVSMVEDLYRTHRSLAERYDQVKPDTTGIGHIVTGGSPFAAAKYQIEKLMTFSDTGYDTYSEHCDVYESEESEVDDPEQEDEEEEEGTDFLHNCTQKEQASLLVVSDEVMKLRDEVRRLNEENKDHRDQIKEKNTICDEVMMLREEIERLRDENETQKEQLKQKDEAKIEVIRQLSLAIDVLKQENVKMRNFIAKESTNKWKKPFDEINKLVGEFSMKLFNGAPKNQPSVELSRCGLKSFANN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02586 556 MobiDBLite consensus disorder prediction 380 400 - -
Spst1g02586 556 PANTHER PROTEIN NETWORKED 4A 251 337 - -
Spst1g02586 556 MobiDBLite consensus disorder prediction 381 400 - -
Spst1g02586 556 Pfam KIP1-like protein 260 333 IPR011684 GO:0003779
Spst1g02586 556 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 258 339 IPR011684 GO:0003779
Spst1g02586 556 Coils Coil 415 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02586 Spst-Chr1 34358431 34374013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02586 - - vum:124828101 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02586 1 34358431 34374013 Spst1g02586 1 34358431 34374013 ECH
Spst1g02586 1 34358431 34374013 Spst7g01147 7 35461560 35463311 PCT