Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02582 ATGAGCAGCCAGACCAAGACCAATGTGGATGGAGTGCACAGTGATGTGAAGGTGGTGGAGAGGCCACCTAAAGAAAGACCCTACGATCTGTTGCTGCGGTTTCTTGGCCTCTCACTCACTCTAGTTGCAACCATCGTTGTTGGTGTTGACAATGAGACCAAAGTCATCTCTTACGCTGAAATGCAATTCAAAGCCACTGCTAAGTGGGAATATATGTCTGCTATGGTGTTTTTCTTGGTGTCAAACGCAATAGCATGCTCATATGCAGCTGCATCATTGGTGATAGCAGTGATGGGAAAAAGCAGTGGATCAAGAAAAGATGATGTGACACATTTGGTGGTAACCGCCTTAGACCTTGTGGTGATGGCACTGTTGTTCTCAGCCAATGGTGCAGCATGTGCAGTGGGAGTGATAGCACAGAAGGGTAACTCGCACGTGCAATGGATGAAAGTGTGCGACGTCTTTGACGCCTATTGCCGCCACGTGACAGCAGCATTAGTCCTCTCCATTATTGGGTCCACAGTGTTTCTCTTGCTGGTGCTGCATTCATTTCTCAAACTCCATTACAGATCAAGAAGCTAG 582 0.4742 MSSQTKTNVDGVHSDVKVVERPPKERPYDLLLRFLGLSLTLVATIVVGVDNETKVISYAEMQFKATAKWEYMSAMVFFLVSNAIACSYAAASLVIAVMGKSSGSRKDDVTHLVVTALDLVVMALLFSANGAACAVGVIAQKGNSHVQWMKVCDVFDAYCRHVTAALVLSIIGSTVFLLLVLHSFLKLHYRSRS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02582 193 Pfam Casparian strip membrane protein domain 28 173 IPR006702 -
Spst1g02582 193 PANTHER CASP-LIKE PROTEIN 1U1 23 188 IPR044173 -
Spst1g02582 193 NCBIfam plant integral membrane protein TIGR01569 30 186 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02582 Spst-Chr1 34344751 34345956 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02582 - - gmx:100784906 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02582 1 34344751 34345956 Spst1g02582 1 34344751 34345956 ECH