Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02578 ATGGACCAAGCCCACGATCCTCGCTTCTGGGTTTCTCCAATGGAGGACGCCCAAGAAATTGAGGAGCAGGCTCATGAAGTGATTTCAGACAAAACATCTGAGAAGAAGCCAGAAACTCGTGATGAAATTCTTTCACGGCACAGGAAAGAGATTTCGCAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAAATTTCTACTGAGCTCAAGGAGAAGCATGCCAAGGAATTGGCTGCATTAGGCTATAGCAGTGGTAATGGAAATGAAAAGAGCAATTTGGACACTTTGGTTAAGGCCATAGCTGGAGTATCTGTTGCTAGTCAACCTGAACATACGAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGCGACATTGTAAGTGATCGAATGATTGAAAACGAGAAATTGGAAAGGAAGTTGAAGCCTCTAGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCGTCCTTTCTGGTGGTAGATCTCCTTATACATTCCAAGAACTTCGAGAAATGGTGGCTGCCTACATGAGAAAGCATACATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTAATTGAGGATGATTCTGATGAATCACTTGCTCAGAAGTTTGAAAATTATTGTAAAGAAGTGGAGTCCACAGCTATATGGGGCGGACAACTGGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGATCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCTAATTCGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCAGTGGTCCCAACATGA 1011 0.4402 MDQAHDPRFWVSPMEDAQEIEEQAHEVISDKTSEKKPETRDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQISTELKEKHAKELAALGYSSGNGNEKSNLDTLVKAIAGVSVASQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQSDIVSDRMIENEKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLAVLSGGRSPYTFQELREMVAAYMRKHTSDFLPFFLSENLIEDDSDESLAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02578 336 Pfam OTU-like cysteine protease 190 330 IPR003323 -
Spst1g02578 336 MobiDBLite consensus disorder prediction 135 157 - -
Spst1g02578 336 MobiDBLite consensus disorder prediction 129 157 - -
Spst1g02578 336 MobiDBLite consensus disorder prediction 24 80 - -
Spst1g02578 336 CDD OTU_plant_OTU5-like 175 334 - -
Spst1g02578 336 SUPERFAMILY Cysteine proteinases 149 335 IPR038765 -
Spst1g02578 336 PANTHER OTU DOMAIN CONTAINING PROTEIN 45 335 - -
Spst1g02578 336 Gene3D - 170 335 - -
Spst1g02578 336 Coils Coil 44 97 - -
Spst1g02578 336 ProSiteProfiles OTU domain profile. 184 336 IPR003323 -
Spst1g02578 336 FunFam Cysteine proteinases superfamily protein 170 335 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02578 K18342 - gmx:100780620 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02578 1 34321063 34324360 Spst1g02578 1 34321063 34324360 ECH