Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02572 ATGCTTCACCGCATCACCCACTCCTCTTCCCCCTCTCTTCTTCTTCTTCCGCGTCTTCTCTCTCACCAACCCTTCCCTTCTTCAAATTTCAAATTCCCTTTCTCACTCTCACCAAAACCTCTCACTCTCAAGGTCCTCTCCATGGCTTCATCTCATTCCATCCACAAGCACACAAACCGACTCGCTTCCGAACAGAGCCCTTACCTTCTCCAACACGCGCACAACCCTGTTGATTGGTATCCGTGGGGCGAAGAAGCCTTCGCTGAAGCGCGCAGGCGTGACGCGCCTATCTTCTTGTCAATTGGCTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGACGAAGCGGTTGCCAAGTTGTTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAACGACCAGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGGGGAGGAGGTTGGCCTCTGAGCGTGTTTCTTTCACCAGACTTGAAGCCTTTGATGGGTGGAACTTACTTCCCCCCGGATGATAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGGTAAAACAGGCTTGGGACAGTAAGAGGGATATGCTGATTAAGAGTGCAGCATATGCTATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCCGATGGGGTTCCGGCTGATGCATTACGTCTGTGCTCAGAGCAGCTCTCGGGGAGCTACGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTTTATCATTCCAAAAAGTTGGAGGAGACAGGAAATTTGGGTGGAGCTAATGGAAGTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGTGGGATTCATGATCATATTGGAGGGGGCTTTCACAGATACAGCGTAGATGAGTGCTGGCACGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCCAATGTATATTTAGATGCGTTTTCTATCACTAAAGATACCTTCTATTCATATATATCACGGGATATCCTCGATTATTTAAGGAGAGATATGATTGGTCCAGAGGGTCAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACAGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGGCAAGCAAAGAGGTTCAAGACATACTTGGAGTGCATGCTCCTCTTTTTGAGGAACACTATTACATAAAGCAATCGGGTAACTGTGACCTATCTGAAATGAGTGATCCTCACAACGAATTCAAAGGAAAGAATGTCCTAATTGAGAAAAAGGAACCTTCAGAACTGGCATCAAAATATGGTATGTCAGTTGAGACATATCAAGAAATTCTTGGAGGATGTAGGCTTAAGTTGTTTGAAGCTAGGTCAAGGCGTCCAAAGCCAAATTTGGATGACAAGGTTATTGTATCTTGGAATGGATTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTCAAGAGCGAAGCTGAAGGGACCAAATTCTACTTTCCTGTTGTCGGTACGGAACCAAAGGAGTACATGAGAATTGCAGAAAAAGCAGCATTTTTTATTAGGAAGGAACTTTATGATGTGGAGACTCGCAAGCTATACCATAGTTTCAGACGTTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATTTCAGGATTGCTAGATCTCTATGAGTTTGGTGGTGGAATTAGCTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATACTTTGTTTCTTGATAAGGCCGGAGGTGGATATTTCAATAATACAGGAGAAGATCCTTCAGTTCTCCTCCGCGTGAAAGAAGATCATGATGGGGCAGAACCGTCTGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCTGAGAACTATAAGCGAAATGCAGAACATCTATTGGTCCGTAAACCCCTTGCCCCTCTCCTCCTAAAAACTGTTCCTTCTCATATATATGACAATATTGGGATGGGATTATTTGAGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCGTGTTCCTTCTCGGAAACAAGTGGTCGTGGTTGGTAGAAGAACGTCTGAGGAATTTGAAAACATGCTTGCTGCAGCTCATGCATTATATGATCCTAATAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGAATTTTGGGAAGCAAGTAACAGCAATGTTGCTCTCATGGCGAAAAATAACTATGTCGTCAACAAGGTTGTAGCTCTTGTTTGCCAAAATTTCGCTTGTAGCCCCCCTGTGACTGATCGTTTGTCACTTGAAGCTTTGGTCTCCAAAAAACCTTCCTCTTCGTTAACATAA 2493 0.4364 MLHRITHSSSPSLLLLPRLLSHQPFPSSNFKFPFSLSPKPLTLKVLSMASSHSIHKHTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKQAWDSKRDMLIKSAAYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEETGNLGGANGSQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGQIFSAEDADSAETEGAARKKEGAFYIWASKEVQDILGVHAPLFEEHYYIKQSGNCDLSEMSDPHNEFKGKNVLIEKKEPSELASKYGMSVETYQEILGGCRLKLFEARSRRPKPNLDDKVIVSWNGLAISSFARASKILKSEAEGTKFYFPVVGTEPKEYMRIAEKAAFFIRKELYDVETRKLYHSFRRSPSKAPGFLDDYAFLISGLLDLYEFGGGISWLLWAIELQETQDTLFLDKAGGGYFNNTGEDPSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAENYKRNAEHLLVRKPLAPLLLKTVPSHIYDNIGMGLFEAVFEKRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGRRTSEEFENMLAAAHALYDPNRTVIHIDPNNKEEMEFWEASNSNVALMAKNNYVVNKVVALVCQNFACSPPVTDRLSLEALVSKKPSSSLT 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02572 830 CDD SSP411 80 202 IPR004879 -
Spst1g02572 830 Gene3D - 529 681 IPR012341 GO:0005975
Spst1g02572 830 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 47 824 IPR024705 -
Spst1g02572 830 FunFam spermatogenesis-associated protein 20 56 228 - -
Spst1g02572 830 SUPERFAMILY Thioredoxin-like 57 185 IPR036249 -
Spst1g02572 830 PIRSF UCP006402_thioredoxin 698 828 IPR024705 -
Spst1g02572 830 PIRSF UCP006402_thioredoxin 42 681 IPR024705 -
Spst1g02572 830 Gene3D Glutaredoxin 56 228 - -
Spst1g02572 830 Pfam Protein of unknown function, DUF255 58 219 IPR004879 -
Spst1g02572 830 SUPERFAMILY Six-hairpin glycosidases 247 641 IPR008928 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02572 - - gmx:100777751 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02572 1 34278300 34283960 Spst1g02572 1 34278300 34283960 ECH