Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02569 ATGGATCGAAGAGGAAGTGGGATTTTGATTGGGACGGAGGGAGGTAGGGATGCAATAAAGGGGCTGGGGTTAGGGTTAGGGTTAGGGCTGGGTGCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTCGAAGAAGGTGAGGCGTGCTCCTTTCAGAACCACGAAGATTATGATGCCACCGTTGATCCCGATGTTGCCCTATCTTACATTGATGACAAAATTCAAGATGTTCTGGGACATTTTCAGAAGGATTTTGAGGGTGGGGTGTCTGCTGAGAATCTGGGGGCAAAATTTGGTGGTTATGGATCATTTTTGCCCACCTATCAGCGCTCTCCTGTTTGGTCTCACCCAAGGACTCCACAAAAAAATCATAGTCAAAATACGCCCAAATCCCCCAATAATTTGCCACCAGAGGGTGGGCAGGGGGATGCTGTACAATGTTCCACGGGAACACAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCTTCAAGAATGGCTGCAAACAAGGGTTTCTCTTTAGATGATGGAACCCATCAAGAAAAATACATGACAGCTAATGCTGATACATCCACTTCTAAGCATGAGTCTCTAAACAAGAAAATTACTAGCACATCAGACCAGAAGACACTGAAAGTTCGAATCAAAATGGGTCCTGATAATTTATCAACACGGAAAAATGCTGCAATATACAGTGAAATTGGTCTGGATGTGTCGCCATCATCATCACTAGATGATAGCCCCTCAGAAAGTGAGGGGCTTTCTCGTGGTCCTCAAGAAGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACAGACCTCCCTCGGCTATTGTCACCACTTACTGATGGTATCATTGAATTAACTGTAAAGGAAATGCGTGCCAGAGAGAGCATACCTGGTCTTGTTCATGTGGATGATGCAGAAAGCGTTGACATATCACTAAATGAATCTAATAATGTAAAAGGTGATAGAAAATTGTCAGGGGGGACTGGGAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATACTCGGAATGATGTTGGGGTGCTGTCAAGAAAGGAACAAAGTTCAGATGCATTTACTATGGAGGAGCTAGTTTCTAACACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTCTCAATGATGACTTGGTTAGGGCTGATGATGGGCCATGTGATTCTTTGAAGGAAGCTAACAAAGTTATGGTGAGGGAGAAAACCTTCTCTGATCAGGGACAAAAGGAACGGCTGGAGCCAACATCTACTGAGGTGAATGGTTTTGCTGAGAGGGCAAAGGGAAGCTCAAGAAGAAAAGTTGTGGGAGATAAGGTTTCTTTTGATGACTATATAGTAAAAGAAAATTCTCATGGAGATAACAATTGCCACTCAATAATAGCTGAATCTCATGTTTCCAGAGTTAGGACCTCATCAAACACTGAAGAGCTTCCTAAGAAGGCTAATCAGAGAGGTAGCCTATGTGAACAAGACAGTATGACATTACCTGTAGTGACTGAACATCCCTTTCTTGGGGGTAAGAAGAAGACAAAGGGAAGTCATGCCACGATGGTTATGGATAAGGAAAAAGAAAACTTGAAGATTGGATCTTCTTCGGTTCCTAAAACAAAAAGGAGTTCTGATGATAGTTCTGCATCAAAAAATGAAACTGAAGATGTCAGAGTACAAAAGAGTCTTGGAAAGACTAGAGATACATACAGAGACTTCTTTGGGGAATTGGAAGATGAGGAGGACAGAATGGATTCAATGGAGACCCCTTACGAAGAAAAAATGAAGGAATCTGAGTTAGTTGAGAGGAGTGCACCTACAACTAGTTATGGAGCAAAGGAGAGATCTGGTGCTAAGAAAGTTGATAAGCCATTATTAACAGCTGAAATATACCCTAAAACAGCCACAAATCTTTGGTGCACTGGAAATGCAAATGGTACTGATGTTGAGAATGGTAAAGGGATACCTGTAATGATACCTCCTGTTGAGATGGAAGATAATTGGGTAATGTGTGACAAGTGTCATAAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGACAACCTACCTGAAAAGTGGGTGTGTAGTATGCTTAATTGGCTGCCAGACATGAATCGATGTAGCTTTAGTGAGGATGACACCACTAAAGCACTTATTGCATTATTCCAAGGGCCTCCCTTTGATGGTCATAGCAACCTGCAAAATGTCTCTGGCAGTGTTATGGTGGGAGGAACCATGGCAACCCAGCATCCTGACCAACACCAGTTAAATAATGATCTGCATGTGACACCTGGGGGGAAGAAAAAGTTTGTGAAGGCGATACCAAATTCTATAAATAAAGACAGCTTTTCTCAATCATCATATCCTATCAAGAAAATCTTTCAGTCAGCGGTGAAAAGTAGGAGTTTAAATGATGTGAACAAGTCTCCTGTCATGAGTGAGGCTGATGTTGCAGCAGACAAACACAAAAATAAGCACAGGACCCTGGAGCACAGTTCTGATAGAGGTGATGTGAAGAATATGAAGGTCAAAAGCAGGAGGGATCATGATCAAGATTTTTCTAGGCCATCCAAGAAATCTAAGACTGACAAAGCTCATTCTACCAATGAAGAGCGGATTGTAGAACAGAGTGGGACTACTAGGAAGGTCAGTCATAGTTCAAATAGCACTCTTCCAACTACTTCAGTTGGCAAAGATCGTCCGAGACAGAAAGACCACTCCTCTTCAAGGGACTCCAAATCAAGAAAAGACAGGCCTCCAGTTTCTGCTGAAAACACAAAAGATAAAGGTCAGGGTTCTTTGGATGAAGGATCTCTGGAGCTGGGAAATTGTGATTCAATCGGTAGTGTGAAGAAGAGGAAACTGAAGGGATATCAGGATCCTAAAACTAACAGCCCAGGTAATCCTCGCCTACAGGAGAGCAAAACTTCTGAGCATGATTTTGGTAATTCCAGGAAGGAAAAGAAGGCAAAAAGTTCAAAATCTGAAGGCAAAGAATCAAGTGCAAGTAAAGGCAGCGGTAGGACTGACAAAAAAGTTAGTCATACGAAGAACAAGAAGTTCAGGCAAAACCCTGAGAGCAGCCTGTCACAGCGGAGTTTGGATGGCATGGACTGTTCAAAAAGGGACTTGGGGTCTTTGCAGGCTTCTGTTGCTGCAACTTCAAGTTCTTCTAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCAGGAAGTGAAGGGCTCTCCTGTGGAATCGGTTTCTTCATCACCTATTCGAATTTCAAATGCAGATAAGTTTCCAAGCAAGGAAATTATTGGGAAAGATGATTCGCATGACATTGTTGCTGTGGACAGTCCAAGAAGATGCTCAGATCGTGAGGATGATGGTGGGAGTGATCGATCTGGAACAGCAAGGAAGGATAAATCTTCCACCATTGGCCACAGGTCAGGTTTTCAGGATAAGGGTGTTAATAACATGTCTGATACTAAACTTAAAGCTGAAACTACTGGCTATTTTACCAATGGTGTTGTTGACTCTATAGTCCCAGATGGGACATATCCAGGCAAAGAGCTGACTAAGCATCCAGTTGAAGACAAAACTGATGTTTATAATGCTAATATGTCTCATACAAGGAAGAATGGCATAGAATCAGGTTTTGAGGACAACAATGACAGCTGTAAGTCAGAGTCCCATGAAGATAAGGTAAAAAATACTAGTTATTCAGGTAAACTGAAAGACCAGTCTCCTCTATGTGAGACAAAACATAAGGATGGAAAAAATAAGTTGCTGGAGAAGTACGGGATCAAGCCTGACCAAAGTGAGAATATACATGCTGTCAAGAAAGATCATACAGGGAAAAATGAGACTAGGAAAAAAGAGAATCACTTAAATCGGGGTCATGAATTTCAAGATGTTAGTACGGATGCATTTCATGCTCCCACTCAGAGTCAGTTGCCAGACTCTGATATTGAAAGATCCACAAAGAGGTCTCTGTCAGAAAGAGCTGATCCAGAAGTACATGGAAAAGGGAAGCTGTTATCATCATTTCCATCTGAAGGATCTCAAGTTGAGACATTGGGTCGTTGCCCACGACCACTTGGTTTACAGAAAGGAAATGGAGATGTCGAAGTTGATCCTTCCAAAGTTGATGATGTCTTAAAGCTACCAAAAAAGCAATTGAAGAAGACCGATCATCAAAATGGAAACCAGCAAATTGGTTCAAGAAATCCCATAATTAATGGTCACAAGTCCAAGGAGCTTGATGCCCCCAGTCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTCAAGCATTTGGCTGATCGTCTAAAGAATTCTGGATCCACTGGTGAGAGCACTGGTCTTTACTTCCAGGCAGCTCTCAAATTTCTTCATGGAGCCTCTCTGTTAGAATCTGGCAACAACGAGAATGCTAAACACAGTGAGATGATTCAATCAAAGCAAATGTATAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCACGAATATGAGAAATTAAAAGACATGGCTTCAGCTGCACTTGCTTACAAATGCATGGAGGTAGCATATATGAGGGTAATATATTCTTCATACACTAGTGCAAGCAGAGATCGGCATGAGTTGCAGACAGCACTGCAAGTGATTCCCCTTGGAGAGTCTCCGTCATCTTCTGCCTCCGACGTTGACAATGTTAACAACTCTACAGCAGCTGACAAGGTCACCACCATATCTAAGAGTATCAATTCGCCCCAAGTAGCTGGAAACCATGTCATTGCTGCACGACATCGTCCTAATTTTGTGCGATTGCTTGGTTTTGCTCAGGATGTTAATTTTGCCATGGAAGCTTCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGCCCGGGTGTGGGCAAGAATACAGATGGTATTTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTTCGTTTGGTACGGGTTGCTGTGGAGGCCATTAATCGATGA 5070 0.4262 MDRRGSGILIGTEGGRDAIKGLGLGLGLGLGAGRREMVESELEEGEACSFQNHEDYDATVDPDVALSYIDDKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLPPEGGQGDAVQCSTGTQSSRLGPGSGNSSRMAANKGFSLDDGTHQEKYMTANADTSTSKHESLNKKITSTSDQKTLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGLSRGPQEAPFESPTIILQIMTDLPRLLSPLTDGIIELTVKEMRARESIPGLVHVDDAESVDISLNESNNVKGDRKLSGGTGRKMKSLEGCESSMEVKGSTKKNTRNDVGVLSRKEQSSDAFTMEELVSNTMKLPLLSSSYSLNDDLVRADDGPCDSLKEANKVMVREKTFSDQGQKERLEPTSTEVNGFAERAKGSSRRKVVGDKVSFDDYIVKENSHGDNNCHSIIAESHVSRVRTSSNTEELPKKANQRGSLCEQDSMTLPVVTEHPFLGGKKKTKGSHATMVMDKEKENLKIGSSSVPKTKRSSDDSSASKNETEDVRVQKSLGKTRDTYRDFFGELEDEEDRMDSMETPYEEKMKESELVERSAPTTSYGAKERSGAKKVDKPLLTAEIYPKTATNLWCTGNANGTDVENGKGIPVMIPPVEMEDNWVMCDKCHKWRLLPVGTNPDNLPEKWVCSMLNWLPDMNRCSFSEDDTTKALIALFQGPPFDGHSNLQNVSGSVMVGGTMATQHPDQHQLNNDLHVTPGGKKKFVKAIPNSINKDSFSQSSYPIKKIFQSAVKSRSLNDVNKSPVMSEADVAADKHKNKHRTLEHSSDRGDVKNMKVKSRRDHDQDFSRPSKKSKTDKAHSTNEERIVEQSGTTRKVSHSSNSTLPTTSVGKDRPRQKDHSSSRDSKSRKDRPPVSAENTKDKGQGSLDEGSLELGNCDSIGSVKKRKLKGYQDPKTNSPGNPRLQESKTSEHDFGNSRKEKKAKSSKSEGKESSASKGSGRTDKKVSHTKNKKFRQNPESSLSQRSLDGMDCSKRDLGSLQASVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRISNADKFPSKEIIGKDDSHDIVAVDSPRRCSDREDDGGSDRSGTARKDKSSTIGHRSGFQDKGVNNMSDTKLKAETTGYFTNGVVDSIVPDGTYPGKELTKHPVEDKTDVYNANMSHTRKNGIESGFEDNNDSCKSESHEDKVKNTSYSGKLKDQSPLCETKHKDGKNKLLEKYGIKPDQSENIHAVKKDHTGKNETRKKENHLNRGHEFQDVSTDAFHAPTQSQLPDSDIERSTKRSLSERADPEVHGKGKLLSSFPSEGSQVETLGRCPRPLGLQKGNGDVEVDPSKVDDVLKLPKKQLKKTDHQNGNQQIGSRNPIINGHKSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSTGESTGLYFQAALKFLHGASLLESGNNENAKHSEMIQSKQMYSSTAKLCEFCAHEYEKLKDMASAALAYKCMEVAYMRVIYSSYTSASRDRHELQTALQVIPLGESPSSSASDVDNVNNSTAADKVTTISKSINSPQVAGNHVIAARHRPNFVRLLGFAQDVNFAMEASRKSRNAFAAANSSPGVGKNTDGISSIKKALDFSFQDVEGLLRLVRVAVEAINR 1689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02569 1689 Coils Coil 1680 1689 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1258 1315 - -
Spst1g02569 1689 Coils Coil 1445 1465 - -
Spst1g02569 1689 ProSiteProfiles Zinc finger CW-type profile. 677 730 IPR011124 GO:0008270
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1332 1351 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1224 1250 - -
Spst1g02569 1689 PANTHER CW-TYPE ZINC FINGER 35 1689 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 913 949 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 522 631 - -
Spst1g02569 1689 Pfam CW-type Zinc Finger 682 727 IPR011124 GO:0008270
Spst1g02569 1689 MobiDBLite consensus disorder prediction 988 1027 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1403 1426 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 111 176 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 485 506 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 236 253 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 559 592 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1062 1105 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1111 1157 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 186 205 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 831 893 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1186 1389 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 236 261 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 143 168 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 831 1172 - -
Spst1g02569 1689 Gene3D - 674 732 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 602 616 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 532 547 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 111 134 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 1158 1172 - -
Spst1g02569 1689 MobiDBLite consensus disorder prediction 894 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02569 Spst-Chr1 34246212 34255205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02569 - - var:108328921 2764.18