Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02556 ATGTTCCTTACTTCCTTTCGCCACCAACAAACACAGAGACACATACACTTCATCAACTTTCCTCATCCCTTGATTTCCACTTCACCGAGGTACCAACCAACCTACCAAATGGCAGCCAAGCCATCTGAAGAAGCTCCTCAAGGAGAAACTCTCAAGTACCAGACGTGGGTTCTGAAAGTCTTAATCCACTGCGAGGGCTGCAAAAAGAGAGTCAAGAAAATTCTTCAGGGAATTGATGGGGTTTATACAACAGAGGTTGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGACGCTGAGACTCTCATCAAGAGGCTTTCAAGATCTGGGAGGCTAGTGGAACTTTGGCCAGAAAAACCACCTGAGAAGAAAGATAATAAAAAGTCTGGAAAATTGAATAAGGGTGGTGATGTTAACAAAGAGAAGGAAGACCAAAAGAATGGTGAACCAGGTGCTGATGGTGGTTCAAATGAGGGTGCTAAAGATGGTGCTGGTGAAGATTCTGACAAAGAAGAACAAGGTGATGAATGTGAAGAGGGAGGTGGTGGCGGTGAAGGTGGCAAAAAGAAGAGAAAGAAAAAGAAGAAGAGCAACAAAGGGGAAAACGCTGGTTCTGCATCTGCTCCTCCTAAGAGTGGAGAAGGAGGGGGAGAAATTAGTGAAGTTGATGCATTAGTGCCTTCAAATTTAGCCATTTCTATGGCTCCCAAGGATCTTATTAGCCCTCCAATTCAGCATGCCTACCCATATCCACATGTGTATTACTCACCTCCTCCTCCTCCAGCATATGGATTAAGCTATAACACAGCATATCCTATCTCTAGTGCTTCATATTATGTTGGTGCCCCTGTCATGCCCATGCATGCTTACACTACTCCATACTCTAGACTACCACCACCTCCTCCACCGTCTGATCCAATCAAGCACTATGGTGATGAGGATGAGTACGAAGGTGGTGGATATTGCTCCATTATGTGA 984 0.4512 MFLTSFRHQQTQRHIHFINFPHPLISTSPRYQPTYQMAAKPSEEAPQGETLKYQTWVLKVLIHCEGCKKRVKKILQGIDGVYTTEVDSLQHKVTVTGNVDAETLIKRLSRSGRLVELWPEKPPEKKDNKKSGKLNKGGDVNKEKEDQKNGEPGADGGSNEGAKDGAGEDSDKEEQGDECEEGGGGGEGGKKKRKKKKKSNKGENAGSASAPPKSGEGGGEISEVDALVPSNLAISMAPKDLISPPIQHAYPYPHVYYSPPPPPAYGLSYNTAYPISSASYYVGAPVMPMHAYTTPYSRLPPPPPPSDPIKHYGDEDEYEGGGYCSIM 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02556 327 MobiDBLite consensus disorder prediction 116 151 - -
Spst1g02556 327 Gene3D - 52 124 - -
Spst1g02556 327 ProSiteProfiles Heavy-metal-associated domain profile. 53 116 IPR006121 GO:0046872
Spst1g02556 327 MobiDBLite consensus disorder prediction 116 221 - -
Spst1g02556 327 Pfam Heavy-metal-associated domain 62 112 IPR006121 GO:0046872
Spst1g02556 327 SUPERFAMILY HMA, heavy metal-associated domain 53 118 IPR036163 GO:0046872
Spst1g02556 327 CDD HMA 62 112 IPR006121 GO:0046872
Spst1g02556 327 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 47 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02556 Spst-Chr1 34146181 34147485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02556 - - gmx:100783119 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02556 1 34146181 34147485 Spst1g02556 1 34146181 34147485 ECH