Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02550 ATGGGAGGCAGAAGATTGAAAAGCAGAGAAACCATGGCCGTTGAATCGGTGACGCCGTCGCCATCTCCTCCGAGATCGGAAGGAAAAACCACTTTACTACAAAACCCCAAGATACCCTTCGCACTCGCTCTTCTCTTCGCCGACGCCCTCCTCGTCATTCTCATAATCGCGTTTGTCCCTTATACGAAGATAGATTGGGATGCTTACATGTCACAGGTTAGCGGGTTTCTCCAAGGGGAGAGAGACTTCCGCAACCTCAAAGGCGACACTGGTCCTCTCGTCTACCCGGCTGGATTTCTCTACATTTACTCTGCATTTCAGTATCTTACCCAAGGACAAGTTTACCCTGCTCAGATTCTGTTCGGTGTGTTGTATGTCATTAACTTAGCAATTGTTCTCGCCATCTTTGTCAAAACCGATGTGGTTCCTTGGTGGGCCCTGTGCTTACTTTCTCTGTCCAAAAGAGTTCATTCTATCTTCGTCCTTCGTCTGTTTAATGACTGTGTGGCCATGACACTTCTTCATGCTGCATTGCTCTTACTTGTGCATCGAAGGTGGAATCTTGGGTTGATTGTGTTTAGTGGAGCTGTTTCTGTCAAGATGAATGTGCTTCTTTATGCTCCACCTTTACTGCTCCTCCTGTTGAAGGCTATGGATATCAACGGCGTGTTATTGGCATTAGCTGGGGCAGCAGTCGTTCAGATATTAGTGGGCCTTCCATTCCTGGTTTCATATCCACTTGCGTACATATCAAGCGCCTTCAATCTTGGCCGTGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAGCCAGTATTTGTGTCCAAGGGATTTGCAATCTTTTTGTTGGCAGCTCACCTCATATTACTTGCTTCATTTGCGCATTATAGTTGGTGCAAACATGAAGGAGGACTTTGCAACTTTCTGCATTCCAGATATGTCTTTATGAGAATGAGGTTTGCAATTTTCTTCTCTTCCTCATTTTCTCAGAAGGTTGGCAAGAGCAGTTCATCATCCCTTCAGATCCTTAATAAAGAACATATTGTGACAACTATGTTTGTTGGGAACTTCATTGGCATTGTATGTGCTCGGTCATTGCATTATCAGTTCTATTCTTGGTACTTCTATAGTTTACCTTACTTGTTGTGGAGAACGCACTACCCAACATTGTTGCGTTTGATTTTGTTCATGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCGAACAGCCTTTCTTCAGCGTTACTTCTCTGCCTTCACTTAATTATTCTCTGGGGTTTATGGTCTGCTCCACCCGAGTATCCTTATGAACAAAATAGGCCATCCTCTCGTAAAAACAAATAG 1353 0.4427 MGGRRLKSRETMAVESVTPSPSPPRSEGKTTLLQNPKIPFALALLFADALLVILIIAFVPYTKIDWDAYMSQVSGFLQGERDFRNLKGDTGPLVYPAGFLYIYSAFQYLTQGQVYPAQILFGVLYVINLAIVLAIFVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLVHRRWNLGLIVFSGAVSVKMNVLLYAPPLLLLLLKAMDINGVLLALAGAAVVQILVGLPFLVSYPLAYISSAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLILLASFAHYSWCKHEGGLCNFLHSRYVFMRMRFAIFFSSSFSQKVGKSSSSSLQILNKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTHYPTLLRLILFMGVELCWNIYPSNSLSSALLLCLHLIILWGLWSAPPEYPYEQNRPSSRKNK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02550 450 MobiDBLite consensus disorder prediction 1 29 - -
Spst1g02550 450 PANTHER NOT56 - RELATED 32 433 IPR007873 GO:0000030
Spst1g02550 450 MobiDBLite consensus disorder prediction 13 29 - -
Spst1g02550 450 Pfam ALG3 protein 43 416 IPR007873 GO:0000030
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02550 25 450 Miscellaneous Gene Families AT2G47760 69.789 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02550 K03845 - gmx:100785253 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02550 1 34106116 34110731 Spst1g02550 1 34106116 34110731 ECH