Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02549 ATGTCTTCCAGTGACCTCAAACATCGACTCACACCCCTTCCAGACACCTCCATCAACGATAAGCGGGGCATTGGAGGGAAACGCGACAAACGAAAGGTGATGGCCAAACGCGGCCTAAGGTCGCTGGCCATAGCTGTTACCTTCCCCCTCTCTCTCACCGTCTTATCGGCATGCATAGGCTCCTCCACTGCCCGTGATGATTCTCTGACTTCCAGAAGGCCTTTCTGGTTCCCACCCTCGTGGGCCCTGCACTTCGCCTCCCCCGCTACAAGCTTCTTGATGGGTCTGGCCGCGTGGATGGTGTGGGCAGATGGAGGTTTCCACAGAAACCCCATTGCGCTGTTGCTTTACTTCGCTCAGCTACTTTTCGCCGTGCTCTGGGATCCCCTTGTGTTCGCTGCTGGGGCTACACGGCTCGGCTTGATGCTGTGTTTAGGGTTGTTTGTGAGCCAGTTCGGGTGCATGCGTGCGTTTCGCTCCGTCAATCCCATCGCTGCTGATTTGATAAAGCCTTGTTTGGCATGGGTTGCATTTCTGTCTGTTGTAAATCTTAAGCTCCTTTTTGTCTGA 570 0.5456 MSSSDLKHRLTPLPDTSINDKRGIGGKRDKRKVMAKRGLRSLAIAVTFPLSLTVLSACIGSSTARDDSLTSRRPFWFPPSWALHFASPATSFLMGLAAWMVWADGGFHRNPIALLLYFAQLLFAVLWDPLVFAAGATRLGLMLCLGLFVSQFGCMRAFRSVNPIAADLIKPCLAWVAFLSVVNLKLLFV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02549 189 CDD TSPO_MBR 46 184 IPR004307 GO:0016020
Spst1g02549 189 Gene3D TspO/MBR protein 37 188 IPR038330 -
Spst1g02549 189 FunFam translocator protein 2 38 189 - -
Spst1g02549 189 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 34 187 IPR004307 GO:0016020
Spst1g02549 189 MobiDBLite consensus disorder prediction 1 28 - -
Spst1g02549 189 Pfam TspO/MBR family 47 187 IPR004307 GO:0016020
Spst1g02549 189 PIRSF PBR 31 189 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02549 Spst-Chr1 34105071 34105640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02549 K05770 - gmx:100785785 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02549 1 34105071 34105640 Spst1g02549 1 34105071 34105640 ECH