Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02547 ATGGAATTGATGTGTCATTGTTCAAGTTTTCTTCTTTCGCCGGAGAACCACAACGCGACGTGTTCGCTTTCTCTCAACTACACTCTCGTTGTCCTCAATCAGAGTCTTCCGAGATTTGCTCCTCTGCTTTGGGACCACGCTCATGTGCGAGTGTGCGCCGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCGCACCAGCAACCTTCCCATGTTCGCTCCAGGTACAAGCCTGATGTAATTAAAGGAGACATGGATTCGATACGCACAGAAGTACTTGACTTCTACGCAAAACTGGGAACTAAGATAATTGATGAGTCGCACGATCAGGACACCACAGATTTACACAAATGCGTCACATATTTACGTGACCTCACCCCAAAGATTGAAGGATCAGAGCTATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTCGACCATGAGATTGGAAATATTAATGTTCTGTGTCGATTTTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCAAAGAATTACTATCATAAAATCTTTATTCAATCATCTGTTGAGGGTCCGCACTGTGGACTCATTCCAATTGGGATGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAAGGACACGGAAATGAGATTTGGAGGTTTAATAAGCACATCGAATATTGTGAAAGGGGAAATAGTTACAGTACAGTCGGATTCAGATCTTCTTTGGACTATTTCTATTAAGAAGCTCTAG 780 0.4385 MELMCHCSSFLLSPENHNATCSLSLNYTLVVLNQSLPRFAPLLWDHAHVRVCADGGANRVYDEMPLFFPHQQPSHVRSRYKPDVIKGDMDSIRTEVLDFYAKLGTKIIDESHDQDTTDLHKCVTYLRDLTPKIEGSELCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNYYHKIFIQSSVEGPHCGLIPIGMPSGSSTTTGLKWDLKDTEMRFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02547 259 PIRSF TPK1 2 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Spst1g02547 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Spst1g02547 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Spst1g02547 259 NCBIfam thiamine diphosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
Spst1g02547 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 168 IPR007371 GO:0004788|GO:0005524|GO:0009229
Spst1g02547 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Spst1g02547 259 Gene3D - 168 258 - -
Spst1g02547 259 PANTHER THIAMIN PYROPHOSPHOKINASE 4 257 - -
Spst1g02547 259 FunFam Thiamine pyrophosphokinase 25 167 - -
Spst1g02547 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 167 IPR036759 GO:0004788|GO:0005524|GO:0009229
Spst1g02547 259 FunFam Thiamine pyrophosphokinase 169 258 - -
Spst1g02547 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
Spst1g02547 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 177 258 IPR036371 GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02547 K00949 - gmx:100795320 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02547 1 34090073 34093259 Spst1g02547 1 34090073 34093259 ECH