Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02544 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTCTATATCACCGTGCAATTAGCTGATTCAAAGAATGCAAAAGTGGATCTTACGCCTGAAGGCATCTTTACCTTCTCTGGCAGTGCTGGCACTGAAGCTCATCAGTATGAGCTAAGACTGGAGCTTTTTGAGAAGGTTAATGTAGAGGAGAGCAAAATTAATGTAGGAGTGCGAAGCATATTCTGTGTAGTGCAGAAGGCAGAAAATGGATGGTGGAAAAGGTTACTGCGTGGAGAAGGCAAAACTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGATGAGGATGAAGAAGATGGCAGTGGTGAACTGGATTTGGGAGGAATGGATTTCTCGAAATTTGGGGGAATGGGTGCTGATGGAATGGGAGGGATGGATTTCTCTAAATTTGGTGGTGATGCAATGGATGATATTGATGAGAGCGATGATGAAGAGCAAGAAGTGTCGAAGCCTGCTGAACACGATGTTGGCGAGGCATCAACGGGGACAAAAGAGGCTGCTCCAAGCACATGA 561 0.4545 MSRHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGIFTFSGSAGTEAHQYELRLELFEKVNVEESKINVGVRSIFCVVQKAENGWWKRLLRGEGKTPHYVKVDWDKWVDEDEEDGSGELDLGGMDFSKFGGMGADGMGGMDFSKFGGDAMDDIDESDDEEQEVSKPAEHDVGEASTGTKEAAPST 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02544 186 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 166 IPR045250 GO:0051879
Spst1g02544 186 MobiDBLite consensus disorder prediction 141 186 - -
Spst1g02544 186 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 123 - -
Spst1g02544 186 SUPERFAMILY HSP20-like chaperones 1 147 IPR008978 -
Spst1g02544 186 CDD p23_hB-ind1_like 5 113 - -
Spst1g02544 186 Gene3D - 2 122 IPR008978 -
Spst1g02544 186 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Spst1g02544 186 Pfam CS domain 6 81 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02544 Spst-Chr1 34076534 34079505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02544 - - ccaj:109812261 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02544 1 34076534 34079505 Spst1g02544 1 34076534 34079505 ECH