Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02538 ATGGCCACGAGTGGGTCAGAGAAGCCGGTGATTGTGGCTGGAATCGACGACAGTGATTTCAGCAAGTACGCTCTCGAATGGATTCTTGATCACCTTCTATCCCCAGCACTTAATTCTATCTTCAAGCTTGTTCTTGTTTATGCCAAACCTTCTGCTTTCTCCAAGATCGGTTTTGTTGGCCCTGGAGCCACTGACTTGTTTCCTGTTGTCGAAGCGGATTTGAAGAGAACAGCAGCCAGAATCACTGATCATGCTAAAGAACAATGCATGGAGAAATCTGTAAAGGACGTAGCAATGGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGAAGCTGTGGAAAGGCACCATGCTTCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTCTAAAAAGGTACATTTTGATCCCAGATATTGCTTTGCAATGGTATAGTTCACGTGTGAAAAAGTTGTTAATGGGGGCGGTTTTGGGCAGTGTAAGTGACTATTGTGCTCATCATGCACACTGCACTGTCATCATCGTGAAGAAGCCAAAGGCCAAACACTGA 555 0.4523 MATSGSEKPVIVAGIDDSDFSKYALEWILDHLLSPALNSIFKLVLVYAKPSAFSKIGFVGPGATDLFPVVEADLKRTAARITDHAKEQCMEKSVKDVAMEVVEGDPRNVLCEAVERHHASMLVVGSHGYGALKRYILIPDIALQWYSSRVKKLLMGAVLGSVSDYCAHHAHCTVIIVKKPKAKH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02538 184 PRINTS Universal stress protein signature 156 178 IPR006015 -
Spst1g02538 184 PRINTS Universal stress protein signature 8 26 IPR006015 -
Spst1g02538 184 Pfam Universal stress protein family 11 178 IPR006016 -
Spst1g02538 184 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 151 180 - -
Spst1g02538 184 Gene3D HUPs 3 184 IPR014729 -
Spst1g02538 184 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 137 - -
Spst1g02538 184 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 184 - -
Spst1g02538 184 CDD USP_Like 11 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02538 Spst-Chr1 34000721 34002801 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02538 - - gmx:100306046 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02538 1 34000721 34002801 Spst1g02538 1 34000721 34002801 ECH