Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02537 ATGGACAGTAACCAAGACAAAAACGTGTTCTCGGAACTAACCGACGACATCGTTTTGAACATCTTCTACAACCTCGAAGACGATCCTCGCCACTGGGCTCGCTTGGCCTGCGTCTGCACCAAATTCTCTTCCCTCGTCACCGATTTCTGTTGGAAGACCAAATGCTCCCGCACCATCCCCACCGACCTCCTCTCCGCCTCCGACCACCCTCCGCTCTCCCTCCACAAACTCACCGTCTGCTGCCCCGGCCTCCGCCATGCCGGCCTCCTCTTCGACACCTCCGACTTCGGCCTCGAACGCGACCTCGGCCTTGACCTTGCTAATCACTCTTCCCTCTCCTATCCTACACCACCGCCACCACAACCACAACCACAACCGCAACCACAACCTCAATCTCAACAAACAATATCCGAATCGAATTCCTCTTCTTCTTCTTCGTGTTGGTCGCTTTTTGATGACCTCTACTACGACACGCTCTACGTGCCGACGGAATCGGAGACGCCGCGGCTGGCGGAGCCGGTGAGCGCGGGCGTGGTTTCGATTGGCGCGTGCAAGAGGCGGAAGGTGTCCCGCGCGTGGCGGTCGCACCTGGCGTCGGGGAGCTGGAGCCTGAGTCGGGAGCAGGGGAGTAAGCTGTTAGGGAGGCAGTTCCGCGACGATATCCTGTACGTGTGCGACTGGCCGGGGTGCGTGCACAAGGAGGAGAAGAGGAAGTACCGGCTCTTCAGAGGCGTTTTCAAGAACTTCAAACGTACTAGGGTTTGGAGAACCATTCACGACGGCAACAAAAAGAAGCTGGATCTGCCCTGCGCCTTCTGCGCCTGCAAATTCACCTGGGATCTCCACTCGGCCTTCTGCCTCCGCCGCGTATTCGGCTTCCACGACGACGGAGAGCCTGTGATTCCAAATCTTTGCTTGCCAAATTCCTCAGGAAGTATTCTTCTCTTGGCAGATTTCTTTTTCTTTCTCTTCACCATTGCTCAAGTTTCTTCTTTCTCCATTCGCATTAACCATTTTTGTTTGTGTTTTGATCTCAAGTTTTAA 1044 0.5517 MDSNQDKNVFSELTDDIVLNIFYNLEDDPRHWARLACVCTKFSSLVTDFCWKTKCSRTIPTDLLSASDHPPLSLHKLTVCCPGLRHAGLLFDTSDFGLERDLGLDLANHSSLSYPTPPPPQPQPQPQPQPQSQQTISESNSSSSSSCWSLFDDLYYDTLYVPTESETPRLAEPVSAGVVSIGACKRRKVSRAWRSHLASGSWSLSREQGSKLLGRQFRDDILYVCDWPGCVHKEEKRKYRLFRGVFKNFKRTRVWRTIHDGNKKKLDLPCAFCACKFTWDLHSAFCLRRVFGFHDDGEPVIPNLCLPNSSGSILLLADFFFFLFTIAQVSSFSIRINHFCLCFDLKF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02537 347 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 4 303 IPR040267 -
Spst1g02537 347 MobiDBLite consensus disorder prediction 130 144 - -
Spst1g02537 347 SUPERFAMILY F-box domain 4 70 IPR036047 GO:0005515
Spst1g02537 347 Gene3D - 1 84 - -
Spst1g02537 347 MobiDBLite consensus disorder prediction 109 144 - -
Spst1g02537 347 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02537 Spst-Chr1 33996762 33998075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02537 - - gmx:100789324 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02537 1 33996762 33998075 Spst1g02537 1 33996762 33998075 ECH