Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02526 ATGAGTTCAATATTCGCCCCTTTTGGTGTGGCATATTCTAATCCATTTGTACACTGCACCTCCACTGGGGATCTAACAAAAATGAAAGCAAGGCGTTCGATCATATTTCTTTGCATTCTGGCTTATGCATACGTGACGGTTTCAGAGGAATTATCAGCGTACGAGGTTCTTGAGAAATATGACCTTCCAGTGGGTCTGCTTCCGCAAGGTGTGACAGAGTATGAGCTAAACCAAAAAAACGGCCACTTCACTGCGTATCTTGAGGAAACATGCTATTTCAGCGTACAATCGTATGAGCTAAAGTACAAGTCCACCATCAAAGGCGTGATCTCCAAGGGGAAGTTGTCGAAGCTGAAGGGTGTCAGCGTGAAAATTGAAGTGTTGTGGATCCCAATCACACAGGTCACTCGCGACGGTGACGACCTCAAATTCTCCGCCGGAGTTGCTTCTGCTGGTTTTAGCACCGACAGCTTTTCCGAGAGCCCTCAGTGTGGTTGTGGATTCGTTTGTGACGATTTCAACCTAAACGGTAACATTTCGCTTCCTGCTTTTTCTTCTCTTTAG 564 0.4592 MSSIFAPFGVAYSNPFVHCTSTGDLTKMKARRSIIFLCILAYAYVTVSEELSAYEVLEKYDLPVGLLPQGVTEYELNQKNGHFTAYLEETCYFSVQSYELKYKSTIKGVISKGKLSKLKGVSVKIEVLWIPITQVTRDGDDLKFSAGVASAGFSTDSFSESPQCGCGFVCDDFNLNGNISLPAFSSL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02526 187 SUPERFAMILY At5g01610-like 33 168 IPR036758 -
Spst1g02526 187 Gene3D - 41 164 IPR036758 -
Spst1g02526 187 PANTHER T31J12.3 PROTEIN-RELATED 45 165 IPR007493 -
Spst1g02526 187 Pfam Protein of unknown function, DUF538 53 158 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02526 Spst-Chr1 33928959 33929712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02526 - - gmx:100500136 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02526 1 33928959 33929712 Spst1g02526 1 33928959 33929712 ECH