Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02520 ATGGAACACGCCACAAAACTCTTATGGGTGTTCGTTCTGTGCGTGGCTGCAATGGCACACCAGGCTGCTGCACAGGATCTATTAAGAGGAATGAGTCTAATCAACAAGGCATGCACAATCGACCCAAACAGAGAACTCTGCTTTCAGGTTCTCCAATCCGACCCACTCACAAGCCCTACCGCAAACCTTAAAGAGTTGGCAATCATTGCCCTGAGGGTTGCTGCCAAAAACGCTTCCGGCATCCTCACCGAGGCCAAAACGCTTATCAACGACGACAACCTCGACCCTGATGTCCAACAAGGTTTGGCCGACTGCAAAGAGAACATCTTGGACGCAGAGAGCCAGCTGGAAGACACCATTGCTGCCTTGTATATCGAGTCCCACGGCACTGAAGTACAGGTTTGGCTCAAAGCTGCCTTGGCTGCAATCGACACCTGCGACGCCTCTATCCCCGGAGACGACGACATTCTCTCCGTTCAGAGCGCCGTCTTCCGCAAGCTCTGCAACATTGCCATCTCCCTCATCACGCTCATCGATAATCCAATCAAACTAGTCTAA 558 0.5197 MEHATKLLWVFVLCVAAMAHQAAAQDLLRGMSLINKACTIDPNRELCFQVLQSDPLTSPTANLKELAIIALRVAAKNASGILTEAKTLINDDNLDPDVQQGLADCKENILDAESQLEDTIAALYIESHGTEVQVWLKAALAAIDTCDASIPGDDDILSVQSAVFRKLCNIAISLITLIDNPIKLV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02520 185 NCBIfam pectinesterase inhibitor domain 7 176 IPR006501 GO:0004857
Spst1g02520 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 178 IPR035513 -
Spst1g02520 185 Coils Coil 102 122 - -
Spst1g02520 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 178 IPR035513 -
Spst1g02520 185 Pfam Plant invertase/pectin methylesterase inhibitor 32 174 IPR006501 GO:0004857
Spst1g02520 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 174 - -
Spst1g02520 185 SMART PMEI_2 29 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02520 Spst-Chr1 33864018 33864575 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02520 - - gmx:102667060 248.054