Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02519 ATGGAACGCACCACAAAACTCTTCTCGGTGTTCGTTCTGTGCGTGGCGGCAATGGCACACCAGGCTGCTGCACAGGAAAATTTAAAAGGAAAGGATCTAATAAATAAGGTATGCAAAAAGTCCCCAACCAAAAACCTCTGCATTCAGGTCCTCTCATCCGACCCACTCACAAGCCCTGATGCAGACCTCAGAGGCTTAGCAGTCATTGCCCTTAGGGTTGCTGCCAAAAACGCTTCCAGCATCCTCACCGAGGCCAAAACGCTTATCAACGACGACCACCTTGACCCTGATGTCCAACAAGGCTTGGCCGACTGCAAGGTGAACATCTTGGACGCCGAGAGCCAGCTGGAGGACACCATTGCTGCCCTGTTGGTCGATTTCCACGACTCTGACATACAGGCTTGGCTCACAGCTGCCTTGGCTGCAATCGACACCTGCGACGCCTCTATCCCCGGAGATGACGACATTCTCTCCGTTCAGAGCGCCGTCTTCCGCAAGCTCTGCAACATTGCCATCTCCGTCATCTCGCTCCTCAACAATCCAAGTAATAATTGTCCAAGTAATAATCCACTTCATAATACAATCAATATTCCAATCAAGATTCCAAATATTCGTAATCCACTTAAGTTAGTCTAA 636 0.4953 MERTTKLFSVFVLCVAAMAHQAAAQENLKGKDLINKVCKKSPTKNLCIQVLSSDPLTSPDADLRGLAVIALRVAAKNASSILTEAKTLINDDHLDPDVQQGLADCKVNILDAESQLEDTIAALLVDFHDSDIQAWLTAALAAIDTCDASIPGDDDILSVQSAVFRKLCNIAISVISLLNNPSNNCPSNNPLHNTINIPIKIPNIRNPLKLV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02519 211 NCBIfam pectinesterase inhibitor domain 7 177 IPR006501 GO:0004857
Spst1g02519 211 Pfam Plant invertase/pectin methylesterase inhibitor 32 173 IPR006501 GO:0004857
Spst1g02519 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 178 IPR035513 -
Spst1g02519 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 173 - -
Spst1g02519 211 SMART PMEI_2 29 174 IPR006501 GO:0004857
Spst1g02519 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 178 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02519 Spst-Chr1 33860261 33860896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02519 - - gmx:102667060 249.98