Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02515 ATGTCTACGCAACCAAAGCTTGGTCGGCTTCCCAGTATCAGAGACAGAGTGGAAGACACTCTCTCAGCTCACCGGAATGAACTCATTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTACAACCCCATAACTTGATTGATGAACTTGACAAACTCCCTGGTGATGATCAGTCAAGAGTGGATCTTAAAAATGGTCCCTTTGGTGAAATTATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTCAGCGTGGAGCAATTAAGTGTTCCTGAATATCTCAGCTTCAAGGAAGAACTTGTGGATGGAAAGCATAATGACAATTTTGTACTGGAACTTGATTTTGAACCATTTAATGCCTCATTTCCTCGTCCATCGCGTTCATCGTCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAATTATGTTCCGCAACAAAGATTCCTTCGAGCCCTTGCTTGATTTCCTCCGAGCTCACAAATACAAGGGCCATGCTCTGATGTTAAATGATAGAATACAAAACATTTCAAAACTCCAAGCTGCTTTGGCCAAGACTGAGGATTATCTTTCTAAGCTTGCACGTGAAACACCCTATTCAGAGTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAAAGGGTATTGGAAACCATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCTACACTGGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTATCTCCTCACGGCTTCTTCGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAAAATGAGATGCTCCTTCGGATCAAGAAACAAGGACTTGATTTCACTCCTAGAATTCTAATTGTTACCAGGTTAATACCTGATGCAAAGGGGACAACTTGCAACCAGCGACTAGAAAGAGTCAGTGGTACTGAGCACACTCATATTTTGCGTGTTCCATTCAGATCAGAGTCAGGAACTCTCCGAAAATGGATTTCAAGATTTGATGTGTGGCCTTATCTCGAGACTTATTCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTTATCCTGACTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACAATCGCCCATGCACTTGAGAAGACAAAATATCCTGATTCAGATATATATTGGAAGAAATTTGAGGATAAATATCATTTTTCATGCCAGTTTACTGCTGACCTAATAGCCATGAATAATGCAGACTTTATCATCACCAGTACTTACCAAGAGATTGCAGGAACGAAGAATACCGTTGGACAGTATGAGAGCCACACTGGTTTTACTCTTCCTGGGCTGTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAAAAGCAGAACAGGCTTACATCCCTACATGGTTCAATTGAAAAGCTATTGTATGATACTGCGCAGACTGATGAATACATTGGATCACTGAAAGACAAGTCAAAGCCAATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAAAACATAACTGGATTGGTAGAATGTTTTGCTAAGAACTCCAAATTGAGGGAACTGGTCAACCTTGTTGTAGTAGCTGGTTACATTGATGTTAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGGTCTTATGAAAGAGTACAATTTAAATGGTGATTTTAGATGGATTGCTGCCCAAACAAATAGGGCACGTAACGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCTTTCTACGAAGCTTTTGGGCTCACAGTTGTGGAGGCCATGACTTGTGGACTCCCCACATTTGCTACTTGCAATGGTGGTCCTGCTGAGATCATCGAGCATGGTATATCAGGATTCCACATTGATCCTTATCACCCTGATCAAGCTTCAGAGCTATTGGTTGACTTCTTCCTGAAGTGCAAGAAGGACCCAAGTCATTGGAAGAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACGTGGAAGATTTATTCCGAAAGGCTCTTGACCTTGGCCGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTATATCCTCAAGTTCCGCGGTTTGGCAAATTCTGTGCCGCTAGCAAAGGATGATTGA 2433 0.4229 MSTQPKLGRLPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDKLPGDDQSRVDLKNGPFGEIIKSAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVPEYLSFKEELVDGKHNDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSFEPLLDFLRAHKYKGHALMLNDRIQNISKLQAALAKTEDYLSKLARETPYSEFEYVLQGMGFERGWGDTAERVLETMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSESGTLRKWISRFDVWPYLETYSEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTSLHGSIEKLLYDTAQTDEYIGSLKDKSKPIIFSMARLDRVKNITGLVECFAKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHGLMKEYNLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATCNGGPAEIIEHGISGFHIDPYHPDQASELLVDFFLKCKKDPSHWKKISDGGLQRIYERYTWKIYSERLLTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRGLANSVPLAKDD 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02515 810 FunFam Sucrose synthase 149 278 - -
Spst1g02515 810 NCBIfam sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Spst1g02515 810 Pfam Glycosyl transferases group 1 568 743 IPR001296 GO:0016757
Spst1g02515 810 Gene3D - 149 278 - -
Spst1g02515 810 Gene3D - 12 148 - -
Spst1g02515 810 Gene3D Glycogen Phosphorylase B; 283 799 - -
Spst1g02515 810 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Spst1g02515 810 CDD GT4_sucrose_synthase 281 766 - -
Spst1g02515 810 Coils Coil 204 224 - -
Spst1g02515 810 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Spst1g02515 810 Gene3D Glycogen Phosphorylase B; 530 757 - -
Spst1g02515 810 FunFam Sucrose synthase 283 569 - -
Spst1g02515 810 FunFam Sucrose synthase 12 148 - -
Spst1g02515 810 PANTHER - 9 809 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02515 Spst-Chr1 33823470 33828564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02515 3 810 Glycosyltransferase AT4G02280 82.426 0.0 1423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02515 K00695 - gmx:100793371 1546.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02515 1 33823470 33828564 Spst1g02515 1 33823470 33828564 ECH