Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02504 ATGGAAGACGAAACTTACACTTTTGGCCGCTCTACTGCCTCCAGAAGCTACCAATCCAGGCTCAAGTCACACTTCGCAGAGCTCTTCATCGATTTTGATGAGGTCAATGGGGATGAGGAGTTTAGGACGGCTTATCCATGCCCCTTTTGCGCCGAGGATTTTGATCTTCTTGAGCTATGTTGCCATATTGACTTGGACCATCCAATAGAAACCAAGGCTGGGATTTGTCCTGTTTGTACCGTGTGGATAGGGTCAAATGTGGTTGATCATATAGCAGCACAACATTTTCAGCTCAAATCAAAATGCTACAAAGATGAATCCTACCCAGCTCTTTCCTTTTCAAGAAAGGGTGAACGGGATGGACACTGGCAACCTTATTCTACCGGGTTGTCACCTGTGATGTCTACCTCCAAGGCATCAAGTGATCCATGGCTGTCATTTTTATATGGTGCATCTGCTGTTGGTGAATGTGAAAATGTGCTGCCAGATTCTTCAAGTGAAATAAGCATTGAAGAAGTACACTCAAATGATGAAGTGTTAGAAAGGTACCTTGAGGCAAATGATGGTTCCAGCCAAAAACTTTCCTTCATATGCAACTACCCAAAAAAGCGCAGGAATGTTCAGCCATATCTATCTGACAAAGACCAAATAGAGAAAGCACAGCGCAGTAAATTTGTACAGGGACTTTTGTTGTCTACTATCCTTGATCCTGACTTCTGA 720 0.4347 MEDETYTFGRSTASRSYQSRLKSHFAELFIDFDEVNGDEEFRTAYPCPFCAEDFDLLELCCHIDLDHPIETKAGICPVCTVWIGSNVVDHIAAQHFQLKSKCYKDESYPALSFSRKGERDGHWQPYSTGLSPVMSTSKASSDPWLSFLYGASAVGECENVLPDSSSEISIEEVHSNDEVLERYLEANDGSSQKLSFICNYPKKRRNVQPYLSDKDQIEKAQRSKFVQGLLLSTILDPDF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02504 239 PANTHER PROTEIN DEHYDRATION-INDUCED 19 31 236 IPR033347 -
Spst1g02504 239 Pfam Drought induced 19 protein (Di19), zinc-binding 44 95 IPR008598 -
Spst1g02504 239 Pfam Stress-induced protein Di19, C-terminal 111 187 IPR027935 -
Spst1g02504 239 Pfam Stress-induced protein Di19, C-terminal 203 234 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02504 Spst-Chr1 33714785 33717752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02504 - - gmx:100796524 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02504 1 33714785 33717752 Spst10g00011 10 144772 146990 ECH
Spst1g02504 1 33714785 33717752 Spst1g02504 1 33714785 33717752 ECH
Spst10g00011 10 144772 146990 Spst1g02504 1 33714785 33717752 ECH