Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02500 ATGTTTGGTCTGGACCCAATAAACAGTACTGGGATAGGTGGGAACCGTAATCGCCAAGCTGGAAAGAAAAGACACCTTTTCCGCACCACTTTCTCTTCCTCCTTTCCCTTCCAACCTTCATCCCAACCTTCCACACCAACACACTCATGGACGCAGCAACAACAACAGACACAAAGGAACATTAGAGCGCGTCACGGTGCGCACGTTTGCACCGCCTCACATGGATTATTCCTCTCCCCCGATTCGCTTCCCTCCCACGCCATCCCTACTCTCATCCACACTCTAGACGCAACCCAAAACCACCCTTCCAAAGGGGACGCGCCAAACCCAACCGGAGGAGGGGGCAAAAACCAAAAAACTAAAATAATGTTTACGATTACGAAATTCTCGGGGTTTTTCTCCGCCGTAATGTTCCTCATTTTTCTTATCATTCTCTCCCCCTCCTTCCAATCCGAAGCAATTCGATCCTCCCACCGGTTTTCCTTCCGCAAAGCCCCTCCCTTCCGTAATGGTGACCAATGCGCCTGGGTTTCCGCCCAAGCAAACGTGTGCGACCCTTCTTTAGTCCACGTCGCCATAACTCTCGACGTCGAATATCTCCGCGGTTCAATCGCCGCCGTGCACTCCATCCTTCACAACTCCCTCTGTCCGGAGAACGTCTTCTTCCATTTCCTCGTCTCCGACACGAATCTCCAAACCCTAGTGGACTCCACCTTCCCGCACCTGAAGTTCAACGTCTATTACTTCGATCCCAACACCGTCTCCCACTTGATCTCCTCCTCCGTGCGCCAAGCGCTGGAGCAGCCTCTCAATTACGCCAGGAACTACCTCGCGGACCTTCTCGAGAGTTGCGTGGAGCGAGTTATCTACCTGGACTCTGATCTGGTGGTGGTGGACGACGTGGCCAAGCTCTGGAGCGCGAGTCTGGGCTCACGCGCCATCGGTGCCCCGGAATACTGTCACGCGAACTTCACTAAGTACTTCACGGCGGGGTTCTGGTCGGAGCCGAGGTTGGCGGGAACTTTCGCGCAGCGGAGGGCGTGTTATTTCAACACGGGGGTGATGGTGATGGATCTGTTGAAGTGGAGGAAGGAGGGGTACACGAGAAGAATCGAGAGGTGGATGGAGATTCAGAAGAGTGATCGGATCTACGAGCTGGGTTCGTTGCCGCCGTTTTTGCTGGTTTTCGCCGGACACGTGGCGCCCATTGAGCACCGGTGGAACCAGCACGGTTTGGGCGGGGATAATGTGAAGGGTAGTTGCCGTGACTTGCACCCTGGTCCGGTTAGTTTGTTGCATTGGTCCGGTAGTGGAAAACCCTGGCTCCGGTTACATTCCAAACGTCCTTGCCCTCTCGATGCTCTGTGGGCTCCCTTTGACTTGTACGCACACTCTTCTCTTAACTAA 1407 0.5437 MFGLDPINSTGIGGNRNRQAGKKRHLFRTTFSSSFPFQPSSQPSTPTHSWTQQQQQTQRNIRARHGAHVCTASHGLFLSPDSLPSHAIPTLIHTLDATQNHPSKGDAPNPTGGGGKNQKTKIMFTITKFSGFFSAVMFLIFLIILSPSFQSEAIRSSHRFSFRKAPPFRNGDQCAWVSAQANVCDPSLVHVAITLDVEYLRGSIAAVHSILHNSLCPENVFFHFLVSDTNLQTLVDSTFPHLKFNVYYFDPNTVSHLISSSVRQALEQPLNYARNYLADLLESCVERVIYLDSDLVVVDDVAKLWSASLGSRAIGAPEYCHANFTKYFTAGFWSEPRLAGTFAQRRACYFNTGVMVMDLLKWRKEGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWLRLHSKRPCPLDALWAPFDLYAHSSLN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02500 468 Pfam Glycosyl transferase family 8 190 443 IPR002495 GO:0016757
Spst1g02500 468 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 449 IPR029044 -
Spst1g02500 468 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 465 IPR029044 -
Spst1g02500 468 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 136 465 - -
Spst1g02500 468 FunFam Hexosyltransferase 190 450 - -
Spst1g02500 468 MobiDBLite consensus disorder prediction 96 116 - -
Spst1g02500 468 MobiDBLite consensus disorder prediction 1 62 - -
Spst1g02500 468 MobiDBLite consensus disorder prediction 26 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02500 Spst-Chr1 33681954 33684962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02500 123 466 Glycosyltransferase AT3G62660 72.452 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02500 - - gmx:100805221 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02500 1 33681954 33684962 Spst1g02500 1 33681954 33684962 ECH