Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02490 ATGGATGCTCTGTGCTTACAGAGTAGCATTTGTGGGATAGCTCCGTTGACCATTCCCATTGCTGCATCTGCACGTGTCAATGATTACGCGTCGCAGTCTCAGGTTAGCGCGGTGGGACGCTCTTTGTTTTCTAGATTCTCTTTTAGATACCCTTTGACGTCTATATGGCCACAACAACCTACGGGGAATGCCGCCGGCTACAATGGTCTTGCCGTCGACGAAGCCGTTTTGGCGGAGAATGAAACGGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGAGGGACAACACGGGAATTGGGTTTCCAAGATTTTTCATGCAAGGTCTGTTTGGAGAGGGGAACAGAGGAGCTGTTATAACGATAACGACAGAGTTGTTGCAAATGATCTAATGGATGAAGAAGAAGAGGAGCAGGAAGAATGTGATGGTTGTAGGGCTGCTTATAATGAAGACCAAGACGAAGAGGAAGAAGAAAATGAAGAGGTTCTCTTCGATAGAGACTCGTTTTCGAGAATGCTTCGGAGGGTGTCATTGCCCGAAGCTAGATTATATGCACGCGTATCTCATTTGGGCAATTTGGCATACTCTATCCCCAAAATCAAACGAGGGAACCTCTTCAAAAAACATGGTCTGCGTTTTGTAACTTCATCCATTGAGAAAAAGAAATTAGCTGCGGCAGCAGAAACAAACCAAACATCGGCTGCAATTCAGAAAGAAGAAACTAGCGAGAAGAACGTGCGGGAAACAAAAGAGGAAAAGAACGGTGGATACATGATGAGTGCATCTGCTGCATGCGAGATTGCTGCTTCTGCTGCCTCTTATCTCCATGCTCAAACAAAGAGCATACTTCCATTTAAATCTTCCAATGCTGTGGAAGGTGAAGGTTCACATGAAGCAAGCAATGGAAGTTTTAACGGTGATAAGATGACAAACACGGAGGAGGCAGCTCTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAAGATGTAAAACAAGCTTTTGCGGATGATTTGAGCTCAACAAGCTCTTCACCCTGTGAATGGTTCGTATGTGACGATGACGAGACTGCTACAAGATATTTTGTGATCCAGGGCTCCGAGTCATTTGCATCCTGGCAAGCAAACCTACTATTTGAGCCAGTTAAATTTGAGGGGTTAGATGTGCATGTACATAGAGGTATATATGAGGCTGCAAAAGGGACATACCAACAGATGTTGCCAGAAATTCGTGCTCACCTAAAACGTCATGATTCCCGTGCAACATTCCGTTTCACTGGTCATTCTCTTGGGGGGAGCTTGGCATTACTTGTAAACCTTATGCTGTTAATAAGAAAGGAAGCACCATTGTCCTCTCTGCTTCCTGTCATAACATTTGGCGCCCCATCCATCATGTGTGGAGGTGATAGTCTTCTTGACAAGCTAGGATTGCCGCGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATAGTACCACGAGCCTTTTCTTGCAAGTACCCTAACCATATTGCAAAACTACTAAAGGCTGTCAATGGTAACTTCCGAAGTCATCCATGCCTTAATAACCAGAAGCTATTGTATGCACCAATGGGTGAACTCTTGATCCTACAACCAGATGAGAATTTTTCACCAAGTCATCATCTTCTGCCCTCAGGAAGTGGTTTATATCTTTTGAGTGGTCACCTGTCAGAATCTAGTGACACATTAAAACAGATCCACGCAGCACAAATGGTGTTCTTGAACTCACCACACCCACTTGAAATATTAAGTGACCGATCTGCCTATGGATCTGGAGGAACCATCCAGAGAGATCACGACATGAATTCCTACTTGAAATGTGTGAGAACGGTGATTCGCCAAGAACTAAACCAGATTCGCAAGGGAAGGAGAGAGCAAAGGAGAGAGGTGTGGTGGCCTCTGGTGCTGCCACGTGGAAGAGAGAGTGATAAAGGGGGTTCCATGATATCGATGAACCTAATTCAAAATCAAGCTTCCTTTGGCATCATTCCCTCAGGGAGAGAGTCATTGAAAAGATTAAGAAGGGTTGTTGCATCCCAACACATGCAATTGTTTGTTGTGCTCCTGTTTCCTGCACGGTTGTTACTGCTGGGGGCATGTAACTTAATTAGCCTATGA 2145 0.4503 MDALCLQSSICGIAPLTIPIAASARVNDYASQSQVSAVGRSLFSRFSFRYPLTSIWPQQPTGNAAGYNGLAVDEAVLAENETEGEGEGEGEGEGQHGNWVSKIFHARSVWRGEQRSCYNDNDRVVANDLMDEEEEEQEECDGCRAAYNEDQDEEEEENEEVLFDRDSFSRMLRRVSLPEARLYARVSHLGNLAYSIPKIKRGNLFKKHGLRFVTSSIEKKKLAAAAETNQTSAAIQKEETSEKNVRETKEEKNGGYMMSASAACEIAASAASYLHAQTKSILPFKSSNAVEGEGSHEASNGSFNGDKMTNTEEAALKATTDSVTAVVAANEDVKQAFADDLSSTSSSPCEWFVCDDDETATRYFVIQGSESFASWQANLLFEPVKFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKRHDSRATFRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHIAKLLKAVNGNFRSHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYLLSGHLSESSDTLKQIHAAQMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKCVRTVIRQELNQIRKGRREQRREVWWPLVLPRGRESDKGGSMISMNLIQNQASFGIIPSGRESLKRLRRVVASQHMQLFVVLLFPARLLLLGACNLISL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02490 714 CDD Lipase_3 318 496 - -
Spst1g02490 714 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 704 IPR043367 GO:0008970
Spst1g02490 714 Gene3D alpha/beta hydrolase 305 528 IPR029058 -
Spst1g02490 714 Pfam Lipase (class 3) 364 500 IPR002921 GO:0006629
Spst1g02490 714 MobiDBLite consensus disorder prediction 226 251 - -
Spst1g02490 714 SUPERFAMILY alpha/beta-Hydrolases 346 531 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02490 Spst-Chr1 33619053 33622080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02490 1 714 Acyl Lipid Metabolism Gene Families AT1G02660 54.434 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02490 - - gmx:100788786 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02490 1 33619053 33622080 Spst1g02490 1 33619053 33622080 ECH