Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02489 ATGGCCATCACTACTCACTCGCTATCCGCCACAGAAAGAAAACACTGGTGGCTTACCAATCGAAAGATTGTTGAGAAATACGTAAAAGACGCTCGGAGTCTTATAGCGACGCAAGATCAGAGGGAGATTGCTTCGGCTCTGAACCTTCTAGATGCCGCACTGGCTATTTCTCCGAGGCTGGACCAAGCGCTTGAACTGAGAGCCAGGGCTCTGCTCTATTTACGCCGGTTCAAGGAGATTGCGGATATGCTTCAGGACTACATTCCGAGCCTCAGAATCAACGATGACTCATCCTCTTCCTCTGTCTCCTCCGACACCTCTTCGCAACAGCTTTCCAGGGAAGGAGTGAAACTTCTCTCTCCCTCTGAGTCGCCGGTGCGGGATCAGAGCTTCAAGTGCTTCTCTGTTTCCGACCTCAAGAAGAAGGTCATGGCAGGGCTGTGTAAAACCTGCGAGAAAGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGAAAACGTCTTGCTAGCGCCACACTCCGGCGTGAGAGTGTCTGCTGGTCACAAGACAGCTTTAATGTTACAAACTTCCAATTCTCCGGCGACGGCCCAAATGCGCCACCCACAACTCCACCGCGAAGTCTTCTGGCGGCAGACTCCGAGAGCGTGACCCAACTTCTCGGCCATATAAAGTTCCTCCTCCGGCGAAGGGCCGCCGCAATGGCCGCCCTTGACGCCGGGCTCTACTCAGAGGCCATCCGCCACTTCTCGAAAATTGTGGACGGCCGGCGCAGCGCATCTCAGAGCTTCCTTGTTGAATGCTACATCCACCGCGCCTCCGCGCACCGTTCCGCCGGTAGAATTGCAGAGTCAATTGCGGATTGTAACCGCACCCTTGCTTTGGACCCCGCTTGCATCCAAGCGCTCGAAATCAGAGCTTCACTCTTCGAAACCATTCGTTGTTTACCCGATTCTCTTCACGACCTCGAACACTTGAAGCTCCTCTACAATTCAATTTTACGAGACCGCAAGCTTCCCGGTCCTGCGTGGAAGCGCCACAACGTGCGTTATAGGGAAATTCCAGGGAAACTCTGCACCCTCACTATTAAAATTCAGGAACTGAAACAAAGGCTGGCTTCTGGAGAAACAGGGAACGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCGCGGTCGGAGTTGGAGAGGGCTCACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGTCAACGGGGTTCATCGAAAGGTGTGAGCTTGCGGATGAGCGTGATATTGAGTCAGTTAAAGAGAGGGCGAAGATGTCATCTTTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACTAATGTAATGAGTAACATCATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGTCTGCTCTGCAAGCTATTCAGGCGCAGAAAGAGAAAGCCAATGAACCTGAGTTGATGAGCAAGGTTGAGTGTATTAGGAGCAACGTGGAGAATAATAATGATAATAACAATAACAATGTGGCTCAAATGTCTCAAAATAAGTCCATGGTGTGTTCTTCTACTGTGAATCCGGCGATGTTTCAGGGTGTTTTCTGCCGCGATATTGCGGTGGTGGGTAACTTGCTTTCTCAGGTGGGGTTTAATCGGTCTATGCCGGTGAAGTATGAAGCGTTGAGCTGTTGA 1737 0.5066 MAITTHSLSATERKHWWLTNRKIVEKYVKDARSLIATQDQREIASALNLLDAALAISPRLDQALELRARALLYLRRFKEIADMLQDYIPSLRINDDSSSSSVSSDTSSQQLSREGVKLLSPSESPVRDQSFKCFSVSDLKKKVMAGLCKTCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASATLRRESVCWSQDSFNVTNFQFSGDGPNAPPTTPPRSLLAADSESVTQLLGHIKFLLRRRAAAMAALDAGLYSEAIRHFSKIVDGRRSASQSFLVECYIHRASAHRSAGRIAESIADCNRTLALDPACIQALEIRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTIKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKSTGFIERCELADERDIESVKERAKMSSLLLYRLVQKGYTNVMSNIMDEEAAEKQRKKSALQAIQAQKEKANEPELMSKVECIRSNVENNNDNNNNNVAQMSQNKSMVCSSTVNPAMFQGVFCRDIAVVGNLLSQVGFNRSMPVKYEALSC 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02489 578 Gene3D Tetratricopeptide repeat domain 21 348 IPR011990 GO:0005515
Spst1g02489 578 Coils Coil 511 531 - -
Spst1g02489 578 SUPERFAMILY Chaperone J-domain 393 431 IPR036869 -
Spst1g02489 578 PANTHER OS01G0273500 PROTEIN 9 578 - -
Spst1g02489 578 Gene3D DnaJ domain 383 531 IPR036869 -
Spst1g02489 578 Coils Coil 474 494 - -
Spst1g02489 578 MobiDBLite consensus disorder prediction 94 125 - -
Spst1g02489 578 SUPERFAMILY TPR-like 248 343 IPR011990 GO:0005515
Spst1g02489 578 CDD DnaJ 397 431 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02489 Spst-Chr1 33610774 33613508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02489 - - vra:106757864 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02489 1 33610774 33613508 Spst1g02489 1 33610774 33613508 ECH