Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02482 ATGGACACCGACGAGGAGACACCGTTGGACGAAAAAGCAAGGAGAACGAGAGATCTGCTAGCCAGTTTCTACTCTCCAATCCCTTCAGAATCCTCCAATAACCCTTTTTCCAAACACATCTCACCCGATGACATCAATTCCTCTTCCTTCCAACCTGATCAGTACATGAAAATCCTGGCGCGAAAGTCGAATTTGGAAGGTCTACTTCAGAAGCACGTTGAAATGGTAGCTGAAATAAAGAATCTAGACACTGACTTGCAAATGCTCGTCTACGAGAATTATAATAAGTTTATCTGCGCTACAGATACTATAAAGAGGATGAAGAGTAATATTTTGGGGATGGAGGAAAATATGGAACAGCTTCTTGAGAAGATAATGTCAGTACAGTCAAGGAGTGACAGTGTTAACACTTCTCTATGCGAAAATAGGGAGCATATAGAAAAAATGCATCGGACATGCAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCTGATAGACTAGGCAAGTGCATCAAGTCTGAGGCCTATGCAGATGCAGTCAGGTTCTACACCGGTGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCAAGATTGTAAGCGAGCATCTGAAGAAGCAATTGCTATCATAGTAAAAAATTTGCAGGGAAAAGTATGTTCAGATTCTGAATCAATGCAAACGAGAGCCGAGGCTGCAGTTCTCTTGAAGCAGTTGAATTTTCCGGTGGACTATTTGAAGACAAAGCTACTTGAGAAGTTGGAGCTTTCGCTTACAGACGTCCAGTTTATCCCTGCAGTAATGAAGAATGATTCTCCCTCTACTCACGAGGAAGCAATTCACGAGTTTGTGGAGGCCATTCGTGCATTTCGAGTGATATTTCCAGATTCAGAAAAGCAATTAGCTAAACTTGCTCAAGATCTAATCACCAAGCACTTTTTAATGATAGAAGGGTATGTACATACACGGATTTCTTCGGAAGATCTACTTGGTGTTCTTCGAGTTATCTGGAATGATGTTCTCCGAATGGATGAAGTCTTAGAGGAAGCATCTCTATCTGATCATTCTCTTGAGGGTACCAAGGATGCTGTCAAGCTGTATATTATAAGTGCATTTTCTCATCTAACGCATGATATCTCAGATCACCTCTTAAAAGTGCTGAAGCGGGGTGGAGCAGAGGATTACTCTCTGGAAGTTGCCCTAGATGCTAGCATAAAAGCAGTTTCCGACGGAGGCAGGAAAGTTTTGCTGGATATGCACAAGATTCTAGATGACAACCTAGAGATTATAGATAAACTTAGAGAGTTAATAATTGATTGGGTTCAACAAGGATATCAAGACTTTTTTAGGGACCTCGAGGAATTAGCAGCTTCCGTTTCCCGTGAAAGTGTTCGAGGTTATGAATATGAACTGTCCTTTGTTCCTGGAGTAATCTCTCAAAAATTTAGGGCAGCTGGTGAAAAATTCTTGCAGCTGCACAAGGAACCAAGAGAAGTTCATATGTTTGTTGATTTATTTCTACAAGAGCTCAAAATTACGAATAATGAAGTGAAGCAGATTTTGCCTCAAGATTTGACGAAGCACCGAAGAGCTGATAGTAATGGAAGTTCTGCTTCATCAAGAAGCAACTCTTTCCGGGAGGAGAAGGAGAAGTTGAGTCGCTCTAATATTCAGAAGGGAAGGAGCCAACAGCTTTTGGAAACACACCTAGCGAAGCTGTTTAAGCAAAAGGTTGAAATTTTCACAAAAGTAGAATATACACAGGAATCAGTCCTTATGAACATTGTTAAATTGTGCCTTAAAAGTATACAAGAATATGTTCGGGTCCAGACTTTTAACCGGAGTGGATTCCAGCAAATTCAATTGGATATTCAGTTCTTGAGGACTCCATTGAAAGAAGTAGTTGAAGATGAGGCTGTAATGGACTTCTTGCTTGATGAGATTCTCCCTTCGATCGATTTTCCACCTTCGTTATTTTGTGAACAGGTGATTGTTGCCGCAGTAGAGCGATGCCTTGATCCGATTCCATTGGAGCTCCCCATATTGGACAGACTTATACAAGCAAAGCTGGCACAAACATAA 2091 0.4084 MDTDEETPLDEKARRTRDLLASFYSPIPSESSNNPFSKHISPDDINSSSFQPDQYMKILARKSNLEGLLQKHVEMVAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEENMEQLLEKIMSVQSRSDSVNTSLCENREHIEKMHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFQDCKRASEEAIAIIVKNLQGKVCSDSESMQTRAEAAVLLKQLNFPVDYLKTKLLEKLELSLTDVQFIPAVMKNDSPSTHEEAIHEFVEAIRAFRVIFPDSEKQLAKLAQDLITKHFLMIEGYVHTRISSEDLLGVLRVIWNDVLRMDEVLEEASLSDHSLEGTKDAVKLYIISAFSHLTHDISDHLLKVLKRGGAEDYSLEVALDASIKAVSDGGRKVLLDMHKILDDNLEIIDKLRELIIDWVQQGYQDFFRDLEELAASVSRESVRGYEYELSFVPGVISQKFRAAGEKFLQLHKEPREVHMFVDLFLQELKITNNEVKQILPQDLTKHRRADSNGSSASSRSNSFREEKEKLSRSNIQKGRSQQLLETHLAKLFKQKVEIFTKVEYTQESVLMNIVKLCLKSIQEYVRVQTFNRSGFQQIQLDIQFLRTPLKEVVEDEAVMDFLLDEILPSIDFPPSLFCEQVIVAAVERCLDPIPLELPILDRLIQAKLAQT 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02482 696 MobiDBLite consensus disorder prediction 24 47 - -
Spst1g02482 696 MobiDBLite consensus disorder prediction 527 562 - -
Spst1g02482 696 PANTHER UNCHARACTERIZED 6 460 IPR014812 -
Spst1g02482 696 Coils Coil 104 131 - -
Spst1g02482 696 MobiDBLite consensus disorder prediction 25 47 - -
Spst1g02482 696 Pfam Vps51/Vps67 45 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02482 Spst-Chr1 33532586 33540199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02482 K20296 - gmx:100818891 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02482 1 33532586 33540199 Spst1g02482 1 33532586 33540199 ECH
Spst1g02482 1 33532586 33540199 Spst7g00857 7 9675367 9677157 PCT