Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02478 ATGTGTACACAAACCCTCCTCAATCAGAGCTATAATCTTTCCATTCTAATCCACTCTCTACTTCGGATCATAGACAGCAACATAACCCCAAAGAAGACGAAACAAACAATGGCAACCATGACTGGAGTGAGTCTTTCATGCCCCAGGGTTTTGTTCAACGCATCGGGCTCACGGCAAAGCGCGCATGCCATAAGATTCGCACTTCCACTCAGCCAACCGATGCGAGCAGGTGCTATCCAGATGGGTCAGGTGATGAGGATCCGACCCGTTCGTGCCGCTCCGGATAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCACAAGAAGCGTGTGCCGGCGATCCGACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCATGCGAGGGACAAGCAAAAGGAAAAGGATTCGGATCCGCTGGAGAACTACTGCAAGGACAACCCGGAGACAATAGAGTGCAAAACTTTCGATGACTGA 507 0.5365 MCTQTLLNQSYNLSILIHSLLRIIDSNITPKKTKQTMATMTGVSLSCPRVLFNASGSRQSAHAIRFALPLSQPMRAGAIQMGQVMRIRPVRAAPDKISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKDSDPLENYCKDNPETIECKTFDD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02478 168 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 40 168 IPR039314 -
Spst1g02478 168 Pfam CP12 domain 97 167 - -
Spst1g02478 168 SMART CP12_2 97 168 IPR003823 -
Spst1g02478 168 MobiDBLite consensus disorder prediction 133 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02478 Spst-Chr1 33487332 33487838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02478 - - gmx:100812168 245.743