Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02472 ATGGAAGATTTGGGAGGTACCCGGTTTGATGGCCTCAGCAATGCTGTTAGGAGGAAGAGAAGTCAGACTTCGCGCAGGCCGCGACCCGATTCCCAGCCTGTTTCTGATGGTCATGAACTGTCTCCCTTGTCCTCAACGCCTTCAGAAGATGCTGGCAAGATTTCTAGTGATGAGAATGTTGGTTACGATGCAAATTCCAAGAGAAAGGAGTTCAATCTTAATCACTGTGTCTCTCAATCCTCCTCGGCGACTGGAGCTGAAGATGAAAAATCTCATAAAAAGAGTAAAAAGGATGGTGGGTTCCACGCATTTTATAATAATGAACCTGGACGGAGTGGTTTGCATAATAAGCGCTGTAGTGAAGGTGTTCTTGCTCCAGCAAATTGGAAAGGTTCTAGCAAAGCAAAGGATAGCCTGGATTTAGAGTCCAGAAATGCAGATTTGTATGGTGGAAGGAATCCTGAGAGTACAAGTTTGGCACAGTTTGGTGGCTCTCAGGATGGATTGGGGAACGAGAACCGGGTTAAAAAGGTTAAACTCAAGGTTGGTGGGGTGACACGTACTATTCAAGCCAATTCAGCAACCAATGGTGCTTCGGGAAGTGGATCAACAATGAAGAGCTCTCGCTCATTGGATGCTTCCAGGCCACGCCAAAAACAGCAGAATAATTCAGATGATAATAATTCTCCTTCTGACAAGAGGAGTGGTCTGCAAGGCGTTCCGTGGAAAGATTTCTCAAGGGGTGGTTTTGGTCTTGGGAAGGAGGAATCGTTGATGGGGAAGATTTCTGGAAAGAACACATCTAGTAAGCTGGGAGACAAGTCTGAACCGGTTCGTAAGAGTAAGCGAGTACCAAAGAGACGTTTACTTGACGGGGAATTTGGTGATGACGACGATGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACATCAAAAGTTTCTGCTGTCTATAGAGATGAAGAAGAATTAAGCAAGAAACATCGAAAGCTATCTAGTGTCTCTAATATGGAAAATGCTGCCACAACAAGGTCAGGCAAAGACATTAAGAAAAGGTCTAGATCTGATAAAGTGTATGAGGACACAGATTATGAGGATGAAGAGGAATCCGGGTCTGATGGTGAGCATGAGGATAAGAAAAAGAAAAAGCAGAGGAAGGAGTCTGTTGATGTATTGATGGACAGTAAGAGGGAAAGTACTCTTACAACCCGTCAACGGGCCCTTCAATCAAGCAAAGACGCATCTGCATCAAGTGCTAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCACCTAGAAAGCAAAAGGAGAAGCTTTCAGAGGTAGACCAGCAATTGAAGAAAGCTGAGGCTGCACAGAGGCGTAAAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTCGGTCAAGACTCTAGTAGGAAAAAGCGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAACTGGCACAGGAAAAGGCAGCAAATGCTCGAATGCATGCTTCAAATACCATCAGATACACAATGGGCCCAACTGGAACAGTTGTGACTTTTCCTGAGGAAATGGGATTGCCTAGCTTATTGAACTCCAAAATTTTCAGTTATCCTCCACCTCGCGAGAAGTGTGCCGGTCCATCTTGTTCAAATCCTTACAAGTATCGGGATTCAAAATCAAAGCTTCCTCTCTGCAGTCTCCAGTGCTACAAGGCTGTCCAGGAGAAGCGGAAAACCATGAAATTGACAGGAATTAGAAAGAGTTCGAAAAACTCTCCCGGGAAGGGGAAGGCCGTTTATGCCAATGAATTTTGGGCGCCTGAGAAGAGTTCGTGCCGGAGACTTTGGTCTATAAGTCCATCCTCCCCTTATTTCCCTGCATACGCACAAGGACAAGGACCACCACCAATGAGGCAGGAGCAGTTACAGAATGTTGTTATTAGTCAGCCTTTTCTAATAATACTCTGTGGGGGAGGGAGCCTGGGTGCTCAGCTTCTTTACCTGGATGCCAATGATCCTAATAATGTCTAA 2049 0.4519 MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQPVSDGHELSPLSSTPSEDAGKISSDENVGYDANSKRKEFNLNHCVSQSSSATGAEDEKSHKKSKKDGGFHAFYNNEPGRSGLHNKRCSEGVLAPANWKGSSKAKDSLDLESRNADLYGGRNPESTSLAQFGGSQDGLGNENRVKKVKLKVGGVTRTIQANSATNGASGSGSTMKSSRSLDASRPRQKQQNNSDDNNSPSDKRSGLQGVPWKDFSRGGFGLGKEESLMGKISGKNTSSKLGDKSEPVRKSKRVPKRRLLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNMENAATTRSGKDIKKRSRSDKVYEDTDYEDEEESGSDGEHEDKKKKKQRKESVDVLMDSKRESTLTTRQRALQSSKDASASSASLIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRKMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANARMHASNTIRYTMGPTGTVVTFPEEMGLPSLLNSKIFSYPPPREKCAGPSCSNPYKYRDSKSKLPLCSLQCYKAVQEKRKTMKLTGIRKSSKNSPGKGKAVYANEFWAPEKSSCRRLWSISPSSPYFPAYAQGQGPPPMRQEQLQNVVISQPFLIILCGGGSLGAQLLYLDANDPNNV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02472 682 MobiDBLite consensus disorder prediction 374 402 - -
Spst1g02472 682 Coils Coil 483 503 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 37 53 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 436 502 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 1 118 - -
Spst1g02472 682 Pfam HIT zinc finger 546 577 IPR007529 -
Spst1g02472 682 Pfam PAPA-1-like conserved region 446 530 IPR006880 GO:0031011
Spst1g02472 682 MobiDBLite consensus disorder prediction 186 235 - -
Spst1g02472 682 SMART PAPA_1_2 445 530 IPR006880 GO:0031011
Spst1g02472 682 MobiDBLite consensus disorder prediction 321 510 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 272 293 - -
Spst1g02472 682 Coils Coil 444 471 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 345 361 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 71 85 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 145 302 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 403 423 - -
Spst1g02472 682 MobiDBLite consensus disorder prediction 86 101 - -
Spst1g02472 682 PANTHER INO80 COMPLEX SUBUNIT B 7 584 IPR029523 GO:0006338|GO:0031011
Spst1g02472 682 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02472 Spst-Chr1 33432561 33439829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02472 - - gmx:100814323 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02472 1 33432561 33439829 Spst1g02472 1 33432561 33439829 ECH