Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02471 ATGGGTTTCAACAAAAGCCTTCTCCTCGCCATAGTGTCCCTCTCTTCCCTTTTCCTATCAACCCATGCCAACATAGGCGCTCTTTCACCCTCTCAATCTCAAATCCCCACCATAGACACCAACATCTTGAACTTAGCATCCAACCTAATCAGACGCACCTTCAAAGCCAGCCCCGAGATCCTAGAATTCTGTAAAGGCACAGAGAACCCTACCCTCTGCTCCGAAACCATTGCCCCACACATCCAAGGCCCCTTCGACCCCATCAAGGCCCTTGAAGTCGAAATGAAGGCCACACTCAACCAATCCCTGAAGGTCACTGAATTCATCTCCGACGCACTCGCAAACCCTAACACCGACAAAAGGGCACGTGGCGCTCTCAGCATATGCAAATCTCAGTACAAGAGCATTAAGGGAACTATCAAAGAAGCCCTGGAATTGTTGGAGCAACAGAACGTGGTTGACGCTTATTACAAGTTCAGCTCCGTTTTATCTGACCAATCAACTTGCGAAGACGCGTTTGCAGAATCTCCCGGAGTTACCATTCCCTTCGCTGAGGACTCTATCGGCGTCTTAGATCTTGGTGGCAATTGCTTGGCCATCATGGATGGGATGGTTACTAGTCGAGTCCATTCTTTATTGGTTTGA 645 0.4899 MGFNKSLLLAIVSLSSLFLSTHANIGALSPSQSQIPTIDTNILNLASNLIRRTFKASPEILEFCKGTENPTLCSETIAPHIQGPFDPIKALEVEMKATLNQSLKVTEFISDALANPNTDKRARGALSICKSQYKSIKGTIKEALELLEQQNVVDAYYKFSSVLSDQSTCEDAFAESPGVTIPFAEDSIGVLDLGGNCLAIMDGMVTSRVHSLLV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02471 214 CDD PMEI-like_2 57 201 - -
Spst1g02471 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 202 IPR035513 -
Spst1g02471 214 SMART PMEI_2 55 200 IPR006501 GO:0004857
Spst1g02471 214 FunFam Invertase/pectin methylesterase inhibitor family protein 57 204 - -
Spst1g02471 214 Pfam Plant invertase/pectin methylesterase inhibitor 62 200 IPR006501 GO:0004857
Spst1g02471 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 204 IPR035513 -
Spst1g02471 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 34 201 - -
Spst1g02471 214 NCBIfam pectinesterase inhibitor domain 56 203 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02471 Spst-Chr1 33426802 33427446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02471 - - vun:114163609 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02471 1 33426802 33427446 Spst7g01432 7 61824833 61825420 PCT