Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02468 ATGTCGATCGGGGATGCTTTTCTATGCTTACTATTCATCGCAACTTGTTCGATTTCAGCTGTTTCTGCTGATTCCATCTATGGCTGCGGTGGTTTTGTCGAGGCGAGCTCATCGTTAGTAAAATCGAGGAAGCAAACTGATAACAAGTTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAACGGTTGCAATGGCAATGAAGATATAAACTTCCGTTTCACTGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTTGGAGGAGAAAGCTGTTCAGTTAAAAGTGGAGGTCCATCAAATGTAAAAGTTGAACTATTGACCCTTTCTGGGGATCTTGTCTCTTCAGTCTTAACTTCATCATCAGGGAGTTACTTGTTTACAAACATAATTCCTGGAAAATATGAGCTACGTGCTTCAAATCCTGATATGGAAGTTGAAGTTAAAGGTTCAACACAGGTTGAATTGGGATTTGGAAACAGGGTAGTAGATGATGTTTTCTTTGTCCCTGGATATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCGATAGTAGGAGTCCATATTTTCTTATATTCAGATGATGTTTCTGAGGTAGAATGTTTGCAAGGTTCTGCTACTGGCCCACGACAAGGAATGGCTCTCTGTCATGCTGCATCAGATGCTGATGGAAAGTTCACATTCAATTCAATACCTTGCGCTGAAGTGGAGCCCTCTAAGGAGCTTCTGAAACATGTTATTAACGTGTCCCATAGGGAGTGGAGCTATGAACTTGTGCCCTACTATAAGGGTGAGAATACAGTATTTGATGTTTCGCCACCCAGTGTCTCAGTTAATGTCAAGCATCAGCATGTAACGGTCCCTCAAAAATTTCAGGTAACTGGATTTTCTGTTGGAGGACGGGTAGTTGATGGAAATGGCATGGGAGTAGAGGGTGTCAAAATCATTGTTGATGGTTATGAAAGGTCTATTACTGATAATCAAGGATATTACAAGCTTGATCAGGTTACATCCAAGCACTATACCATACAGGCTCAAAAGGAGCATTACAAATTCAAGAAGTTGGACAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATGAGTGCCATCTCATACAATCTTTGTGGTTTAGTTAGGATGGCTAATGGTGATCTGAAAGCAAAGGTGGCTTTAACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCTTCCTGGGGAATATCGGTTGTCAGCCATTGCTGCAAATCCTGAGAATGCTGCAGGACTCATGTTTTCTCCGTCTTATATTGATGTTGTGGTCAAAAGTCCCTTGTTGAATATTGAATTTTCACAAGCTCTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATTTGTATCTGTTAATCTGGTGAGACAGGTTGAGAAACATAATGAAGAGAGAAAAACAATTAGCTTGACCACCGAGAGTTTTGAATTTCAGTTTACAGATGTCATTCCTGGAAAATACAGGCTTGAGGTCAAACACAGTTCCCCTGAATCCATCACCTTGGAAGATAATTGGTGCTGGGAACAGAGCTTCATAGATGTAACTGTTGGTCCTGAGGACTTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCATAATGTTGATGGTTACCTGACTCAACACGATGGGTCCATTGTGAATTTGAAAATTCAGAAAGGTTCCCAGCATATATGTCTAGAACATCCTGGTGTACATGATTTTCATTTTGTTGACTCTTGTATCTTCTTTGGGAGTTCATCGGTGAAAATTAATACATCTGATCAATCGCCCATCCATCTTACAGGAGCAAAGTATCTTCTTAAAGGACAAATAAATGTGGATTCTGGCTCACTTGATGCATTGCCTGAGAATATAGGTGTTGATGTTAAACATGACGGAGCTGGTGTTATTGACTATGCTACAGCCACACTGAAGTCCTATGCGAAAGATCAAAAAGATACTGCTATATTTGAGTATTCCGTTTGGGCCAATCTAGGAGAAAAACTTACCTTTGTTCCTTGGGACTCAAGGAATGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTATCAGTGACAGATGACAATTGCCAAGCTTATATCCCTACATTTTCTTGTCAAGTGGGTGCATACATTGAAGGATCAGTTTCACCTCCCCTTTCTGGCGTCCATATCAGAGTTTTTGCTGCTGGGGGGAGCAGCATTACTGCACTTAAAAGTGGTGAACTAGTTCTTGAAACAACCACTGATACTGATGGTTCCTATGTGGCAGGACCTCTGTACAATGATATTGGTTACGATGTTGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCGCCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTTTGTACACATACATCACAAAGATGATGCTAAAGAGTCTATTCCTTCTGTTCTGTTATCTTTGAGTGGTGACAATGGTTACAGAAACAACTCAGTATCAGGGACTGGAGGGACATTCCAGTTTGATAATTTGTTTCCTGGAATGTTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTTCAGAGAAGTTATTTTCCAGGCCACACGTGTAGCCTACAGTGCTACAGGTGTAGTCACTCTGTTGTCAGGTCAACCCAAAGGAGAAGTTTCAGTTGAAGCCCGGTCAGAATCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCTTCTGGAAATTATCGTCTAAGAGGATTACAGCCTGATACTGTCTATGTTGTCAAAGTGGCAAGAAGGGATGCTGTAGGCAGTTCTAATGTAGAACGTGCATCTCCAGATTCTATTGCTGTGAAGGTTGGAAATGAGGATATCAAGGGTTTGGATTTTATAGTTTTCGAGGAGCCCGAAATGACAATTATAAGTTGCCACGTTGAAGGAAATGGTACAAATGAACTACGTAAACATCTAATGGTAGAAATCAGGTCAGCTAGTGACCTTAACAAGATAGAGTCCGTCTTCCCCCTGCCAATTTCTAATTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCACTAAGTTCCCTTAAATTTGAGTCTGATATCATTGAGGTTGACTTGGAGAAAAATGTGCAAATCCATGTGGGCCCTTTGAGATACAGGATCGAAGATCAACTGAAGCAGGAGTTGACTCCTGCACCAGTATTCCCTCTTATAGTTGGATTCCTAGTTGTCGCGCTGTTTATTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACAGTAGACATACCCACACCAGGACTCAATGCGGCTTCAAGAAAAGACGTGAAGAAGCCAATGTTGCGAAAGAAGACCTATTAA 3651 0.4111 MSIGDAFLCLLFIATCSISAVSADSIYGCGGFVEASSSLVKSRKQTDNKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSVKSGGPSNVKVELLTLSGDLVSSVLTSSSGSYLFTNIIPGKYELRASNPDMEVEVKGSTQVELGFGNRVVDDVFFVPGYSISGFVVAQGNPIVGVHIFLYSDDVSEVECLQGSATGPRQGMALCHAASDADGKFTFNSIPCAEVEPSKELLKHVINVSHREWSYELVPYYKGENTVFDVSPPSVSVNVKHQHVTVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGYERSITDNQGYYKLDQVTSKHYTIQAQKEHYKFKKLDNYMVLPNMASIEDMSAISYNLCGLVRMANGDLKAKVALTHGPDNVKPQKKQTDENGNFCFEVLPGEYRLSAIAANPENAAGLMFSPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVSVNLVRQVEKHNEERKTISLTTESFEFQFTDVIPGKYRLEVKHSSPESITLEDNWCWEQSFIDVTVGPEDLEGILFVQKGYWVNVISTHNVDGYLTQHDGSIVNLKIQKGSQHICLEHPGVHDFHFVDSCIFFGSSSVKINTSDQSPIHLTGAKYLLKGQINVDSGSLDALPENIGVDVKHDGAGVIDYATATLKSYAKDQKDTAIFEYSVWANLGEKLTFVPWDSRNDGQKKLLFYPREHQVSVTDDNCQAYIPTFSCQVGAYIEGSVSPPLSGVHIRVFAAGGSSITALKSGELVLETTTDTDGSYVAGPLYNDIGYDVEASKPGYHLKQVAPHSFTCQKLSQIFVHIHHKDDAKESIPSVLLSLSGDNGYRNNSVSGTGGTFQFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGEFREVIFQATRVAYSATGVVTLLSGQPKGEVSVEARSESKGYFEETVTDSSGNYRLRGLQPDTVYVVKVARRDAVGSSNVERASPDSIAVKVGNEDIKGLDFIVFEEPEMTIISCHVEGNGTNELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPLSSLKFESDIIEVDLEKNVQIHVGPLRYRIEDQLKQELTPAPVFPLIVGFLVVALFISMPRLKDLYQATVDIPTPGLNAASRKDVKKPMLRKKTY 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02468 1216 Gene3D - 349 423 - -
Spst1g02468 1216 Pfam Carboxypeptidase regulatory-like domain 965 1017 - -
Spst1g02468 1216 Gene3D Immunoglobulins 143 218 IPR013783 -
Spst1g02468 1216 SUPERFAMILY Carboxypeptidase regulatory domain-like 348 407 IPR008969 -
Spst1g02468 1216 SUPERFAMILY Starch-binding domain-like 962 1019 IPR013784 GO:0030246
Spst1g02468 1216 FunFam Carbohydrate-binding-like fold 143 215 - -
Spst1g02468 1216 SUPERFAMILY Hypothetical protein PA1324 119 196 - -
Spst1g02468 1216 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 15 1202 - -
Spst1g02468 1216 SUPERFAMILY Cna protein B-type domain 884 941 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02468 K26500 - gmx:100815384 2181.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02468 1 33384788 33403143 Spst1g02468 1 33384788 33403143 ECH