Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02466 ATGGCTCCTCCGAACGATCCAGTGAATAACACGTTAAGACTTGAGTCACTGGAAAAGGTTTTCGAGTTATCTCACGGGACGTTCACCGTGAGAGGTGTGCCATTACTCTCTCATGTACCCGAGAACGTCACTCTCAGTTCTTTCTCCTCAATCTGTGAACCCCGTGATGCCCCACCTTCCATCCTTCAACGTGTCATTGCCGTGTCACACAAAGGTGGCTTCCTCGGATTCTCTCATGTTTCACCCTCCGACAGATTGATAAACTCCTTGGGAAGTTTCAGCGGTAGAAACTTCCTTAGCATATTCAGGTTCAAAACATGGTGGTCTACTCAGTGGGTTGGAAATTCCGGTTCAGACTTACAAATGGAAACCCAGTGGGTCCTCATAGAAGTCCCCGAAACAAAATCCTATGTCGTAATTATTCCCATAATAGAAAAAAGTTTCAGGTCCGCACTTCACCCTGGCTCTGATGGCCATGTCATGATTTGCGCGGAGAGTGGTTCTACTCAAGTGAGAGAATCGAGTTTCGGTGCAATTGCATATGTCCACGTGGCTGAAAACCCTTACAACTTGATGAGAGAGGCCTATAGTGCTCTCAGGGTTCACCTTAACTCGTTTAGGTTGTTGGAGGAGAAAACGGTGCCAAGAATTGTTGATAAATTCGGGTGGTGCACTTGGGATGCGTTTTACTTAACCGTGAACCCTGTCGGGGTATGGCATGGGCTTAAGGATTTTGCTGAGAGTGGCGTGGCTCCTAGGTTTGTTATCATTGATGATGGTTGGCAGAGTGTGAGTTTCGATGATGATGACCCCAACGAGGATGCTAAGAATCTTGTTCTTGGTGGGGAACAAATGACTACGAGGCTTCATAGGTTCGAAGAAGGTGACAAGTTTAGAAAATACCAAAAGGGGCGTCTCTTGGGTCCTAATGCTCCTTCTTTCAACCCAGAGACGGTTAAGGAGTTGATTGCGAAGGGGATTGAAGCCGAACATTTGGGGAAGCAGCGTGATGCTGCTATTTCATCTGGGGGTTCTGATTTGGCCGAGATTGAGTTGAGGATTGTGAAGGTGAGAAAGGAAATAGACGATCTATTTGGGGGGAAGGGAGAGGAGAGCAACGAAAGTGGAGGGTGTTATTGCAACGAATTAGAATGTGGTGGGATGAAGGATTTCACAAGGGACTTGAGGACTGAATTCAAAGGTTTGGATGATGTTTATGTGTGGCATGCGCTCTGTGGCGGATGGGGTGGTGTGAGGCCAGGAGCTACACATGTGGATTCGAAAATAACACCATGCAAACTCTCTCCTGGCCTCGATGGGACCATGGTAGATCTTGCTGTGGTTAAAGTAGTGGAAGGTTCCATAGGGCTTGTTCATCCTGATCAAGCTAATGACCTCTACGATTCCATGCACTCTTATCTTGCCCAAGCGGGTGTTACTGGAGTCAAAATTGACGTCATTCATTGTCTTGAATACATATGCGAGAAATATGGAGGTAGAGTGGAGCTTGCCAAGGCTTATTACGATGGGTTGTCAAACTCAATTGTCAAGAATTTCAACGGAAGTGGAATCATCGCTAGCATGCAGCAGTGCAACGACTTCTTCTTCTTAGGAACCAAGCAAATTCCCTTGGGAAGAGTTGGGGATGACTTTTGGTTCCAAGATCCCAATGGGGACCCAATGGGAGTGTACTGGTTACAGGGGGTGCACATGATTCATTGTTCCTACAACAGCTTGTGGATGGGGCAGATAATTCAACCCGATTGGGATATGTTTCAATCGGATCATGAGTGTGCCAAATTTCACGCAGGTTCAAGGGCTATTTGTGGTGGTCCTGTGTATGTGAGTGACAATGTTGCCTCTCATGACTTTGATCTCATCAAGAAGCTTGTCTTCCCTGATGGTACCGTGCCCAAATGTATATATTTTCCCCTTCCAACAAGAGACTGCCTTTTTAGGAACCCTCTTTTTGACCAAAAAACCGTTCTCAAAATTTGGAACTTCAATAAGTATGGAGGAGTTATTGGTGCTTTCAACTGTCAAGGAGCTGGTTGGGACCCGAAGGGGAAGAAATTCAGGGGTTTCCCTGAGTGCTACAAACCAATATCATGCACTGTTCATGTAACTGAGATTGAATGGGACCAAAAGAAAGAAGCAGCACATATGGATAAAGCAGAGGAGTATGTTGTGTACCTCAATCAAGCTGAGGTACTGCATTTCATGACCCCCAAGTCTGAACCACTGAAATTTACTATTCAACCTTCCACCTTTGAACTCTACAACTTTGTCCCAATCGAAAAGCTAGGTGGCAACATAAAATTTGCCCCAATTGGGCTGACAAACATGTTCAACAGTGGAGGGACAATTCAAGAATTGGATTATATTGAGAAAGGTGTTAAGGTTAAGGTCAAGGGTGGTGGGAGATTCCTTGCTTACTCAAATGAATCTCCAAAGAAGTTCCATCTGAATGGTTCTGATGTTGCTTTTGAGTGGGTGTCTGATGGTAGACTGACTCTCAACCTTGCTTGGATTGAAGAGAATGGCGGGGTTTCTGATTTGGCGATTTTCTTCTAG 2574 0.4553 MAPPNDPVNNTLRLESLEKVFELSHGTFTVRGVPLLSHVPENVTLSSFSSICEPRDAPPSILQRVIAVSHKGGFLGFSHVSPSDRLINSLGSFSGRNFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLIEVPETKSYVVIIPIIEKSFRSALHPGSDGHVMICAESGSTQVRESSFGAIAYVHVAENPYNLMREAYSALRVHLNSFRLLEEKTVPRIVDKFGWCTWDAFYLTVNPVGVWHGLKDFAESGVAPRFVIIDDGWQSVSFDDDDPNEDAKNLVLGGEQMTTRLHRFEEGDKFRKYQKGRLLGPNAPSFNPETVKELIAKGIEAEHLGKQRDAAISSGGSDLAEIELRIVKVRKEIDDLFGGKGEESNESGGCYCNELECGGMKDFTRDLRTEFKGLDDVYVWHALCGGWGGVRPGATHVDSKITPCKLSPGLDGTMVDLAVVKVVEGSIGLVHPDQANDLYDSMHSYLAQAGVTGVKIDVIHCLEYICEKYGGRVELAKAYYDGLSNSIVKNFNGSGIIASMQQCNDFFFLGTKQIPLGRVGDDFWFQDPNGDPMGVYWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHECAKFHAGSRAICGGPVYVSDNVASHDFDLIKKLVFPDGTVPKCIYFPLPTRDCLFRNPLFDQKTVLKIWNFNKYGGVIGAFNCQGAGWDPKGKKFRGFPECYKPISCTVHVTEIEWDQKKEAAHMDKAEEYVVYLNQAEVLHFMTPKSEPLKFTIQPSTFELYNFVPIEKLGGNIKFAPIGLTNMFNSGGTIQELDYIEKGVKVKVKGGGRFLAYSNESPKKFHLNGSDVAFEWVSDGRLTLNLAWIEENGGVSDLAIFF 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02466 857 SUPERFAMILY (Trans)glycosidases 217 630 IPR017853 -
Spst1g02466 857 PANTHER - 21 847 IPR008811 -
Spst1g02466 857 Pfam Raffinose synthase or seed imbibition protein Sip1 22 840 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02466 Spst-Chr1 33364506 33367444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02466 21 857 Glycoside Hydrolase AT4G01970 58.323 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02466 K06611 - gmx:100815922 1568.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02466 1 33364506 33367444 Spst1g02466 1 33364506 33367444 ECH