Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02463 ATGGCAAATAGACCGGATCCAGATATTGATGATGACTTTCGTGAGCTTTATAAAGAGTACACTGGCCCCCCGGGGTCCGCTACGACGAACACCCAAGAGAGAACAAAGCCAAATAAGAGGTCTAATGCAGGGTCTGATGAGGACGATGAAGCTCGGGACCCTAATGCTGTTCCGACCGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAAAGGAATTGGAAGAAAAGAAAAGAGGAGGAAATGATCTGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGATGCCCATCTACCCTTGGAGCAAATCGCAAGTCTCAGGATTTCTTTGAAAGGATACCAGCTAGAGACAAAAATGTACGGGCACTTTTCCCAGAGAAAGTTTTAAGCCAGATAGAAAGGGATATTGGTTGCAAAATTAAGATGGATGAAAAGTTTATAATCGTCAGTGGCAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCAGTACACAAGATTCGAGAGGAGAGTGATCAAAGGGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTCCAATTAATGCCCGGTTTCAACGGCCGGAGCCCCAAAGGCCTCATTCTGGACCACGAAATACATCTCAGTTTCAACAACAAAGGTTTGGTAGGCAGGAGAGGGCCGTTGAAGACAGAATCCGGGAAGATGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCTTATGGAAATAGTGGAGCTAGAGGTCGATCAAGCCGGTCAAGATCTCCAAGACATGCCCCTTATGCAGGAAACTCATATAATTCGTTTGATGGTCGTAATCAAAACATGGGTGCTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGCTTGATTACAATGCCACCCCACAGACTTTGGAAGAATTAGAGTTGGAGTATAAGAATGAGGCAGCGGAGCTAATGAAAATCCGAGACAGAGAAGAAGATGAAGAAAATTTCAAGCATAGGGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTGGCCTGGTAAGGGCCACACATGCAAAACAGTGGGAAAATTTTCTTCAGCATGATGCACAGAGGCGTCAACAGCAGGCAGTTCAACAGATGTCTTCTGGTTATCGGGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGATCCACTGTCAATCCTCCTCCCTATGCTGGGACGAATTTACCGTTGGATTCAAGGAACAGGTTCTCAGACAACATGGAAACATATCCTACTAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1389 0.4442 MANRPDPDIDDDFRELYKEYTGPPGSATTNTQERTKPNKRSNAGSDEDDEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFPEKVLSQIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREESDQRGSSSSQMTRSRSPERSPINARFQRPEPQRPHSGPRNTSQFQQQRFGRQERAVEDRIREDVQKFARGSPQAYGNSGARGRSSRSRSPRHAPYAGNSYNSFDGRNQNMGAYRNDGWDSHRRESGIQPGHQLDYNATPQTLEELELEYKNEAAELMKIRDREEDEENFKHREAIRDLREKYMSKVGLVRATHAKQWENFLQHDAQRRQQQAVQQMSSGYRGFKQQSFPEYDGSTVNPPPYAGTNLPLDSRNRFSDNMETYPTRPHDNFGEFHRRGDFAKAYNRY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02463 462 MobiDBLite consensus disorder prediction 23 38 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 228 243 - -
Spst1g02463 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 1 76 - -
Spst1g02463 462 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Spst1g02463 462 MobiDBLite consensus disorder prediction 181 198 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 39 55 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 1 18 - -
Spst1g02463 462 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Spst1g02463 462 MobiDBLite consensus disorder prediction 175 285 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 211 227 - -
Spst1g02463 462 MobiDBLite consensus disorder prediction 268 285 - -
Spst1g02463 462 Coils Coil 319 343 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02463 - - gmx:100806099 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02463 1 33283850 33286413 Spst1g02463 1 33283850 33286413 ECH