Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02461 ATGGCAGCTTCAACTCTAACCCCGATTTGTTCAATAAAAACCTTGAATCCTCAAAACCATGGCCTTCAAATAAAATTCTCAGTTTCCACTTTCACCCCTCCCAACCAGAACAGAAGAAGGAGCCTTCAAATCCGATTATCATCTTCCGCAAATCAAAATCAGAATCAGTCTTCTCCCGGATTGTACTCCGCAAAGAAATTCGAGCTCACCGCATCCAACGTCGACCTCGTTCTCGAAGATGTTCGCCCTTACCTCATCTCGGACGGTGGCAACGTCGACGTGGTCTCCGTGGAAGACGGCGTCGTATATCTCCGTCTACAAGGAGCGTGCGAGAGTTGCCCCAGCTCCACCACAACCATGACGATGGGTATCGAGCGCGTTCTGAAGGAGAAATTCGGAGACGCCGTCAAGGACATTCGCCAAGTATACGATAACCAACCCAAGGAGACAACCGTTGAGGCTGTGAATAATCATCTTGATATATTGAGAGCGGCCATAAAGAATTACGGAGGCAGCGTACAAGTTTTATCCGTTGAAAGTGGGGAGTGCCACGTGAAGTATGTTGGACCTGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTACCTAG 648 0.483 MAASTLTPICSIKTLNPQNHGLQIKFSVSTFTPPNQNRRRSLQIRLSSSANQNQNQSSPGLYSAKKFELTASNVDLVLEDVRPYLISDGGNVDVVSVEDGVVYLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNQPKETTVEAVNNHLDILRAAIKNYGGSVQVLSVESGECHVKYVGPDSIGSGIKAAIKERFPDILNVTFST 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02461 215 Gene3D - 66 150 IPR034904 -
Spst1g02461 215 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 62 213 - -
Spst1g02461 215 Pfam NifU-like domain 75 134 IPR001075 GO:0005506|GO:0016226|GO:0051536
Spst1g02461 215 FunFam NifU-like protein 3, chloroplastic 66 149 - -
Spst1g02461 215 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 149 212 IPR034904 -
Spst1g02461 215 Gene3D - 151 213 IPR034904 -
Spst1g02461 215 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 72 144 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02461 Spst-Chr1 33272410 33273895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02461 K22074 - gmx:100527356 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02461 1 33272410 33273895 Spst1g02461 1 33272410 33273895 ECH