Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02460 ATGGATGCCAAAGATATCCTGGGATTGTCCAAAAACACATTCCCTCCTCTGGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAACGAAAACCAGATGGCATTTCACGCGAGGTGTATGCGCTTACAGGTGGATTGGCCCCTCTTATGCCTGCAATTGAAGCTTCTCAATTGAAGAAAAAACCTCTTCCTCTTGAAAAGATTACTTGGCAGTGGCTTCCTTTCACCAGTTCTGCTCGTAAAGATAATCTTCAACTTTATCACTGGGTACGAGTTGTCAATGGTGTTCCTCCTACGGGGGATTATTCTTTTGCCAAGTATAACAAGACTGTTGATGTGATCAAATACACAGATGAGGAGTATGACAAGTATTTGACAAATCCTATGTGGACCAAAGAGGAGACAGATCAACTATTTGACTTGTGCGAGAGATTTGATCTCCGATTTGTTGTAATAGCTGATAGGTTTCCATCACCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTTTCACGGGCTATATTAGTTGCCAGAGCTCCATCTTCTGGGGATGTTGCAGCACATCCTCTTGTTAAGGAACCATATAATGTTTCACAAGAAATGGAACGAAAGCGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATAGCTGAATCACGCATTCCCCCCAAGAGAGTATCAATTGTGCACCAAGCTCCACCTCTAGTTGTGACCCAGTTCATTCATAAGGGCTTTCTTTTGGTTCCTGATCAAATTGTTTATGCAGGTCATCAGGATTTTTTTGTTGCTGCTATTAATGAAATCGGACAAAAACACCATTACCCACATTGTCCTATATTAAACCATGTTTTGAATGATGCCTTCGTCGATATTAAGCATGTTGCTGAAGAGTCTCAGTTGGCTGCTTCGAATGCTGGTGCAGAAGTTACAGAAAGGGCTGTCCCTGGTGAAACTGTCTCTCCATCGACTGTGCAACTTCCATCAATGGTTGTGCCTCCCACGTTAACAGATAATGCATCTACTTTAGCTTCTCTTCGTATGCTTCGTGTATATTTGAGGACATATGCACTTGAGCAAATGGTGCAAGCTGCAAATGCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACCTTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACCAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAAAGAAATACTAACTTGGCTTAACCTCCAGAAACAGGTTCAATATAAAGAGGCTGAAGGTTCTTCTTTTCGTGATGGATCATATAGTGAAACACCTGGCACACCTAAGCATTTACATCGTGCTGGGGATCAGGATAGGACATTCGTTCCAGATGCAGTGAATTTCGGAGTGGAAAGGATTGGCAAAAAGGACCAAAAGCGCAAGGCACCTGGAGCTCCATCGGCTCATAAAAGACCTAGAAAACTAAAGGCCTCAGATCTTTAG 1524 0.4285 MDAKDILGLSKNTFPPLEKKSRPPKESQRKPDGISREVYALTGGLAPLMPAIEASQLKKKPLPLEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKTVDVIKYTDEEYDKYLTNPMWTKEETDQLFDLCERFDLRFVVIADRFPSPRTVEELKDRYYSVSRAILVARAPSSGDVAAHPLVKEPYNVSQEMERKRALSMVLSQTRQQERRDEEVLVEAKRIAESRIPPKRVSIVHQAPPLVVTQFIHKGFLLVPDQIVYAGHQDFFVAAINEIGQKHHYPHCPILNHVLNDAFVDIKHVAEESQLAASNAGAEVTERAVPGETVSPSTVQLPSMVVPPTLTDNASTLASLRMLRVYLRTYALEQMVQAANASAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYSETPGTPKHLHRAGDQDRTFVPDAVNFGVERIGKKDQKRKAPGAPSAHKRPRKLKASDL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02460 507 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Spst1g02460 507 MobiDBLite consensus disorder prediction 1 33 - -
Spst1g02460 507 Gene3D - 98 184 - -
Spst1g02460 507 SMART sant 125 174 IPR001005 -
Spst1g02460 507 MobiDBLite consensus disorder prediction 477 491 - -
Spst1g02460 507 CDD SANT_DMAP1_like 129 171 - -
Spst1g02460 507 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 498 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Spst1g02460 507 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Spst1g02460 507 MobiDBLite consensus disorder prediction 440 507 - -
Spst1g02460 507 MobiDBLite consensus disorder prediction 18 33 - -
Spst1g02460 507 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02460 K11324 - cave:132170322 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02460 1 33262802 33270858 Spst1g02460 1 33262802 33270858 ECH