Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02453 ATGGCCCCCGAGCTTGTCCCCACCGTCGCAAAATCCGGTGCCACGTTTGCCAAACCCACCACCCTGCCACGGCGTGCCTACGTCACATTCCTAGCCGGAAACGGTGACTACGTGAAAGGGGTGGTTGGTCTCGCCAAAGGGTTGCGAAAGGTCAAAACCGCTTACCCATTGGTGGTGGCCGTCCTCCCCGACGTGCCGGAGGAGCACCGTAATATCCTGGAGTCTCAGGGCTGCATCGTCCGTGAGATCGAACCCGTTTACCCCCCCGAAAACCAGACCCAGTTCGCCATGGCCTATTACGTCATCAACTACTCCAAGCTCCGTATCTGGGAGTTTGTGGAATACAGCAAGATGATCTATCTGGACGGAGACATTCAGGTGTATGAGAACATAGACCACTTATTTGAACTACCTGATGGTAATTTCTACGCTGTAATGGATTGTTTCTGCGAGAAGACATGGAGTCACAGTCCTCAGTACAAGGTGGGGTACTGCCAGCAATGTCCGGAGAAGGTGCAGTGGCCCACCGAATTGGGTCAGCCCCCTGCACTTTACTTCAACGCTGGCATGTTCGTGTTTGAACCTAGCATGGCCACTTACCACGACCTCTTGAAAACCTTGCAAGTCACTACTCCCACATCGTTCGCGGAGCAGGACTTCCTGAACATGTACTTCAAAGACATTTACAAGCCAATTCCTTTGTCCTACAACCTTGTCCTCGCCATGCTGTGGCGTCACCCCGAGAATGTTAAGCTCGAGGAAGTTAAGGTTGTTCACTACTGCGCAGCGGGGTCGAAGCCATGGAGGTATACTGGGAAAGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGCAGAAATGGTGGGATATCTACAACGATGCTTCGCTTGACTACAAGGCATTGGGTGCAAGTGAAGCTTCAGCGGATGGTGTTGGCATTGAACCATTCGTGCAGGCTCTATCAGAGGTTGGTCGTGTTCAATACGTCACTGCACCTTCAGCAGCTTGA 1014 0.5227 MAPELVPTVAKSGATFAKPTTLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRNILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFELPDGNFYAVMDCFCEKTWSHSPQYKVGYCQQCPEKVQWPTELGQPPALYFNAGMFVFEPSMATYHDLLKTLQVTTPTSFAEQDFLNMYFKDIYKPIPLSYNLVLAMLWRHPENVKLEEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVQKWWDIYNDASLDYKALGASEASADGVGIEPFVQALSEVGRVQYVTAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02453 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 300 IPR029044 -
Spst1g02453 337 FunFam Hexosyltransferase 23 301 - -
Spst1g02453 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 296 - -
Spst1g02453 337 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Spst1g02453 337 CDD GT8_Glycogenin 25 296 - -
Spst1g02453 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 300 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02453 Spst-Chr1 33229050 33230498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02453 1 337 Glycosyltransferase AT1G56600 72.303 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02453 K18819 - gmx:100809287 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02453 1 33229050 33230498 Spst1g02453 1 33229050 33230498 ECH
Spst1g02453 1 33229050 33230498 Spst10g01784 10 18227199 18228508 ECH