Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02441 ATGGAATCGGCGAACGGAGCAATGGCAGAGAAGGACCAACGCTTGACGGAATGGCGCATGCACCGTGGCCCCTACCTCGGAGATATCTCAGCTCTCTGTTTTCTCCACCTTCCCAATCTTTCTCTTCCTCTTCTGCTCGCGGGTTTGGGTTCAGAAATTGCTGTGTATGATTTGGAACTCAGTAAGAGAATAAGGTCTTTCTCTGTATTCGAAGGAGTTCGCGTCCACGGTATCGCTTCTAGTTTCCCTCGCGAGTCCGTGATTGCTGTGTTTGGGGAAACGAGAGTAAGGCTTTTTAGCTTTGAATTTGATGGCGTTTCGGGGAGCGCAGAGTTGACGCTAGTTCATTTGCTGCCGAAGTTTGGTCATTGGGTTTTGGATGTTTGCTTCCTCGAGGGATGCTTACCTCATTCCAATGTGGAGGGTCATTTTCTTGCTGTAGGATGTAGTGACAATTCAGTTCATGTTTGGGATATTTCTAACTCTATTGCGGTTCTTAAGGTTCAATCTCCAGTACGGTGCCTTCTGTACTCAATGCGATTATGGGGTCACAATCTTGAAGTTCTCCGAATTGCATCTGGTACAATATTTAACGAGCTTTTACAGATCAAAATCCTGCTTGATCCACATACTAGAACTAAAGACCTCATGCAAAAAACACGCAAAATAGTTCAAGCCAATCCCAGTGTCATCTTCAAGGATTATAAAGTTTGGTTCGGGCAGATTATTGTTTGGAAACTGGCCCATCAACACAATGAATCTTCAAGTCATCGAGAAAACCATTATCATCAGAGCATTTCATCCTCCGATTGCTTCCAGCTTAAGGATCAACTGTTTGAGGCTATTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCAACTTGTGGATCTAAACTGGTATCTGTCTCTGATGACCGGAGTGCACGTGTCTGGGCTGTTTCTATTGAAAAGGAACATGCATTCTCCCATGATCCCATTGCCCTTATCTTATTTGGACATAATGCCCGGGTTTGGGACTGCTCTATTTCTGATAATTTGATTGTCACTGTGAGTGAAGATTGTACATGTCGCATATGGGGAGTTGATGGTAAACAACTGCAAGTCATTAAGGAGCACATTGGAAGAGGTATATGGAGATGTTTGTATGACCCAAATTCATCACTGCTTATAACTGCTGGGTTTGACTCTGCCATTAAAGTACATCGACCTCATGTGTCTCTGCCCAGGGCTTTGCAAGCAGTACAGGGATCCCCTAGTAGGACAGAGTTGTTTCCCATTCGCATCCCTAATGTGTCAGAGCATGTTGGATATATGGACAGCAAGAGTGAATATGTTCGATGTTTACGCTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTATCATGCTAAATTATGTGATACTGGAGGTACTCAGTGGAATCAACTTGTCCATGTCAGCAATGGGGCACCTATTATCTGTATGGATTTATTGTCCAAGGACTCTGATGAACATGACTGTGGTGCTGAGGATTGGATTGCCATTGGAGATGGTAAAGGGAATATGACAATTATTGAAGTTGCCAAGGATTATCATACTCCTACAGTTAGATTGTGCTTTACTTGGCCAGCTGAAATGGAGAGACAGCTCTTGGGTACTTATTGGTGTAAATCTCTGGGATGTAGGTATATCTTCACAGCTGATCCTAGAGGAACATTGAAACTCTGGAGATTGCCTGACCCACACTCTGATCTTCAGAGCTCCATGAGGAGTAACAAATTATCACATATAGCAGAGTTCGTATCGAATTATGGAATGCGGGTAATGTGTTTGGATGCATGCATGGAGGGAGAGGTCTTAGCATGTGGAGATGTACGGGGTAATATGATTCTGTTCCCTTTGCTAAAGAATCTGGTTTTGAACATAACTGCTGCACAAGAAATGAAGATACCTCCAATAAATAATTTCAAAGGAGTTCATGGGATTTCAAGTGTCTCCAGTGTTTCTGTGACTAAGCTTGGTTATAACCAGATAGAGATATGCTCAACTGGAGCTGATGGTTGTATATGCTATCTGGAATATGATAAAGAAATGCATAATTTGCAATTTACGGGAATGAAACAAGTGAAAGAATTGTCTTTGATTGAGTATGTTTCTGTGGATAACAAGTCTGGTCATAGATTGCCAAGTAGCTATGCAGCTGGTTTTGCTTCGGTGGATTTCATAGTTTGGAACTTGGTGAATGAGAATAAGGTGGTGAACATTCCCTGTGGTGGATGGCGACGTCCTCATTCCTATTATCTAGGTGATATACCAGAGATAAAGAACTGCTTTGCTTTTGTCAAGGATGAATTGATACATATACATAGACACTGGATTCATAATAGAGATGGGAAGGTGTACCCTCAAAATTTGCACATGCAGTTCCATGGTAGAGAGATACATTCCTTGTGCTTTATCCCTGATGATGTGTTTGTTGGAGATAATTTTAAGTGTACCTTATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAGGATGGAACTGTGAGGTTGACTTGGTACTCTCCAGGCATTGAAAATTGGGCCATGTCAAAACTTCTTGGAGAGCATGTTGGAGGATCCGCGGTAAGATCATTATGTTGTGTGTCAAAAGTACACACAATTTCATCAGATATAGGTGAGGTATCTGATGGGAGGATTGAACTGGACGCTGTTGAGAACAAAGATAAACCAACATTACTGATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGATATTAAAAAATAAGAGGCTGGACTCCAAAAATGACTTCCTAATCAATCATCAGGACAAATCAGAAGGCGTTGATGACCCTTTTTTGTCAAGTTTGTCCTCATCAATGACATTCCAGTGGCTTTCCACTGACATGCCTGCTAAATATTCAATTACGCATGATACTCCCAAAAATAATATGGAGAAGATAGTTGGTGTTGCTGAAAATGTATCTAATATAAATAATGATGCCAGAAATATTTCCGAGAGTGGAATGGCAAACTTGATCAAAGATAAACATGAAGATGACTGGAGGTATCTTGCAGTCACAGCTTTTCTTGTTAGATATTTTGGTTCCAGGCTATCTGTCTGCTTTGTTACTGTCGCATGTTCAGATGCTACGCTTATGTTACGGGCGTTAATTTTACCCTATCGCTTGTGGTATGATGTCGCCTTACTGGTTCCTTTAGCGGCACCTGTTTTGTCATTGCAGCATGTCATATTTCCCCTCTCTGAGCCTTGTAAAGGTTTGTATTCTGTGGCAGTCATTACTGGCCAGAGCTCTTCTGCACCTCATAACCCCTTCCTTTCATGCGGATGTGCTAGTTTTATTGCAATAAGCCAAATTATTTCTAAGTTTGTCTCTTCAAAAGTTAAGATGGTTTTGTCGATAGTCAAAATTAATGGTGAAATGCTGGGAAATCAGCTTATTCTATTGAGGAAGCTTATTCATAGCACCAGTGCCTTCTATAAATTTGATTCATCTTATGTCCGTATTTTTTTTTTTTTCGCAGAAAACATCCGTGGTGGAAATGTTTATATTGTGATTAGTGGGTCTACTGATGGGAGTGTTGCTTTTTGGGACCTAACTGACAGTGTTGAAGCTTTTATGCAGCGGGTTTCAGTTTGTAATGTTGAAAAGCTTTTTGATTGTCAAAAACGACCACGCACTGGGAGAGGAAGTCAAGGTGGTAGACAGTGGCGATCCTTAAGCAGAGACTCATCAAAGAAAAGACAAGACAACAGTCTGGTCAATTTGAAAACCAAAGAGAAGACCACAAGCATCAGCTGTGTTACACAGGGAACCTCTTTCATGCCATGTGATTTTGAAGACAGCAAGATGGGTTGTTCCCAATCCACACATATGGCTCCCCTGGAGTTAGAAAGCAAGACTGATAAATCGTCAGTGGAAATATGTGAAATACAGCCTCTATGCCTTCTGCAAAATATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATTATTAGTGGGCAAAATACTGACAGTTGTCAAGTGTACACCGTAGTTAGTGGGGGTGATGATCAAGCACTTAATCATCTCATGGTTGAATTATCACGTAAATCAAAAAATTTAAATGATGGAATTTTGAGCACAGAGATCACTCATATTGTCTCTGTACCTGAATATGGAAAGGACATCAATTTTCAATATCGGAGCAAGAAATATGAGATTAGATTCTTAAATCATGAAAAATTACCCTCTGCACATAGCTCTTCTGTCAAAGGTGTCTGGACAGACGGATCATGGGTGTTTTCCACTGGACTTGATCAGCGGGTCAGATGCTGGCATCTTCAGCAGAGCAAACTAGTCGAGCATTCATATTTAATAGTTAGTGTTCCAGAGCCAGAGTCGTTATCTGCTAGGGCTTGTGGCAGGAATCAATATCAAATTGCTGTTGCTGGAAGAGGGATGCAGATAATTGATTTTTCTGAATCTTCAGACAAGATTGATGACTGCTTAGGTTCTGCAATTGCGTCTGGATCAAGTCCCAAGCATCGAAGTTGTCACCTCTATAGAAGGGGGAGAACTAGTCAAGGATTCGGCATAGCAGTGACAACTATGAAGTTGCACGGTTTTATGCTCATTGAACTGGACACTGAACTTGGTTTTCGATGTGATGAATTGGTCTCTCACCGACATTGA 4725 0.4129 MESANGAMAEKDQRLTEWRMHRGPYLGDISALCFLHLPNLSLPLLLAGLGSEIAVYDLELSKRIRSFSVFEGVRVHGIASSFPRESVIAVFGETRVRLFSFEFDGVSGSAELTLVHLLPKFGHWVLDVCFLEGCLPHSNVEGHFLAVGCSDNSVHVWDISNSIAVLKVQSPVRCLLYSMRLWGHNLEVLRIASGTIFNELLQIKILLDPHTRTKDLMQKTRKIVQANPSVIFKDYKVWFGQIIVWKLAHQHNESSSHRENHYHQSISSSDCFQLKDQLFEAIHVCKLIGHEGSIFRIAWSTCGSKLVSVSDDRSARVWAVSIEKEHAFSHDPIALILFGHNARVWDCSISDNLIVTVSEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHRPHVSLPRALQAVQGSPSRTELFPIRIPNVSEHVGYMDSKSEYVRCLRFSCQDSLYVATNHGYLYHAKLCDTGGTQWNQLVHVSNGAPIICMDLLSKDSDEHDCGAEDWIAIGDGKGNMTIIEVAKDYHTPTVRLCFTWPAEMERQLLGTYWCKSLGCRYIFTADPRGTLKLWRLPDPHSDLQSSMRSNKLSHIAEFVSNYGMRVMCLDACMEGEVLACGDVRGNMILFPLLKNLVLNITAAQEMKIPPINNFKGVHGISSVSSVSVTKLGYNQIEICSTGADGCICYLEYDKEMHNLQFTGMKQVKELSLIEYVSVDNKSGHRLPSSYAAGFASVDFIVWNLVNENKVVNIPCGGWRRPHSYYLGDIPEIKNCFAFVKDELIHIHRHWIHNRDGKVYPQNLHMQFHGREIHSLCFIPDDVFVGDNFKCTLFSKSSWIATGCEDGTVRLTWYSPGIENWAMSKLLGEHVGGSAVRSLCCVSKVHTISSDIGEVSDGRIELDAVENKDKPTLLISVGAKRVLTSWILKNKRLDSKNDFLINHQDKSEGVDDPFLSSLSSSMTFQWLSTDMPAKYSITHDTPKNNMEKIVGVAENVSNINNDARNISESGMANLIKDKHEDDWRYLAVTAFLVRYFGSRLSVCFVTVACSDATLMLRALILPYRLWYDVALLVPLAAPVLSLQHVIFPLSEPCKGLYSVAVITGQSSSAPHNPFLSCGCASFIAISQIISKFVSSKVKMVLSIVKINGEMLGNQLILLRKLIHSTSAFYKFDSSYVRIFFFFAENIRGGNVYIVISGSTDGSVAFWDLTDSVEAFMQRVSVCNVEKLFDCQKRPRTGRGSQGGRQWRSLSRDSSKKRQDNSLVNLKTKEKTTSISCVTQGTSFMPCDFEDSKMGCSQSTHMAPLELESKTDKSSVEICEIQPLCLLQNIHQSGVNCLHVSEIISGQNTDSCQVYTVVSGGDDQALNHLMVELSRKSKNLNDGILSTEITHIVSVPEYGKDINFQYRSKKYEIRFLNHEKLPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLQQSKLVEHSYLIVSVPEPESLSARACGRNQYQIAVAGRGMQIIDFSESSDKIDDCLGSAIASGSSPKHRSCHLYRRGRTSQGFGIAVTTMKLHGFMLIELDTELGFRCDELVSHRH 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02441 1574 SMART WD40_4 598 638 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 540 582 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 1170 1213 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 280 319 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 806 859 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 111 158 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 654 698 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 1419 1457 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 369 409 IPR001680 GO:0005515
Spst1g02441 1574 SMART WD40_4 330 367 IPR001680 GO:0005515
Spst1g02441 1574 SUPERFAMILY WD40 repeat-like 566 887 IPR036322 GO:0005515
Spst1g02441 1574 Gene3D - 5 200 IPR015943 GO:0005515
Spst1g02441 1574 Gene3D - 331 552 IPR015943 GO:0005515
Spst1g02441 1574 SUPERFAMILY WD40 repeat-like 1199 1522 IPR036322 GO:0005515
Spst1g02441 1574 SUPERFAMILY WD40 repeat-like 48 637 IPR036322 GO:0005515
Spst1g02441 1574 Gene3D - 1314 1552 IPR015943 GO:0005515
Spst1g02441 1574 ProSiteProfiles Trp-Asp (WD) repeats profile. 1200 1222 IPR001680 GO:0005515
Spst1g02441 1574 MobiDBLite consensus disorder prediction 1239 1266 - -
Spst1g02441 1574 Gene3D - 553 939 IPR015943 GO:0005515
Spst1g02441 1574 ProSiteProfiles Trp-Asp (WD) repeats profile. 141 167 IPR001680 GO:0005515
Spst1g02441 1574 PANTHER WD REPEAT PROTEIN 17 205 - -
Spst1g02441 1574 Gene3D - 240 330 IPR015943 GO:0005515
Spst1g02441 1574 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 287 318 - -
Spst1g02441 1574 ProSiteProfiles Trp-Asp (WD) repeats profile. 287 318 IPR001680 GO:0005515
Spst1g02441 1574 Pfam WD domain, G-beta repeat 286 318 IPR001680 GO:0005515
Spst1g02441 1574 Pfam WD domain, G-beta repeat 338 366 IPR001680 GO:0005515
Spst1g02441 1574 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02441 K24737 - gmx:100780968 1806.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02441 1 33094513 33113328 Spst1g02441 1 33094513 33113328 ECH