Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02438 ATGTCTAAAGATTTTTTAAATTCTGGATTGCATCGAGTTTTGCAGGTTAGATATGGCAGGCACTATGGCAATAATGACCAAACAGCATCTGCTGACCTACATCTACCTTCTAGTTTACATTTCACTTTCATCAGGGGTTATTCTGTACAACAAGGCAAGGCACAGATACGCAACAAATTCATTCGTTCATGTCTTGTGATTGACCTTGTATTATATTATATTTTTCTCAATCTCTTTCTTCTGGTGGGCATTGGTTTATTGCAGTGGCTCCTCTCTACATTATATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGGTGTGGCCTTTTTGCTTGTCCGTGTTTTGAAGGTTGTGTCACCAATTAAAATGACCTTCTATATATATGCAACTTGTGTGGTCCCAATAAGTGCCTTCTTTGCAGCCAGTCTGTGGTTTGGTAATACTGCTTATTTGTACATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTGATGCCAGTGGCAACATTTCTTGTGGCTGTAACTTGTGGAACTGAGAAATTACGGTGTGATGTATTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCTTATGGTGAAATTCAATTTAATGTGCTCGGTACAGTTTATCAGGTTACAGGAATAATTGCCGAAGCTTTGAGGCTGGTATTAACTCAAGTTCTTCTTCAAAAAAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTTTTTATCCCATGGTACATCCTCGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGATATTTTTCTCAAATGCTGTTTGTGCTTTCGCATTGAATCTTTCCACATTCCTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGGGTGGCTGGTGTTTTGAAAGACTGGTTACTTATCACTCTTTCAACTGTCTTATTTCCTGAATCAATGATTACCGGTCTTAATATTATCGGCTACGCTATTGCTTTAATTGGTGTCGTTATTTACAACTACATTAAGGTCCGAGATGTTGGCGCATCTCAACATCAAACTATCCAAGATGAATCAGCAAAGGAGCTGCAGACACAGAAAAATGCAGATGATGACATAGACAACAGAGAGGAGTCTCTATGGAATGATTCAGTTTCTGATACTCATTTAGATGAAGAAGCACCTTTAATGGCTTCGGCACGGATGTCTCATCTTGGATTTGGACGAAAACCAGCTTAG 1290 0.3953 MSKDFLNSGLHRVLQVRYGRHYGNNDQTASADLHLPSSLHFTFIRGYSVQQGKAQIRNKFIRSCLVIDLVLYYIFLNLFLLVGIGLLQWLLSTLYFNFPFPITLTMIHMAFSGGVAFLLVRVLKVVSPIKMTFYIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIQFNVLGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNAVCAFALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESMITGLNIIGYAIALIGVVIYNYIKVRDVGASQHQTIQDESAKELQTQKNADDDIDNREESLWNDSVSDTHLDEEAPLMASARMSHLGFGRKPA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02438 429 PANTHER SOLUTE CARRIER FAMILY 35 76 366 - -
Spst1g02438 429 MobiDBLite consensus disorder prediction 380 405 - -
Spst1g02438 429 MobiDBLite consensus disorder prediction 375 405 - -
Spst1g02438 429 Pfam Triose-phosphate Transporter family 96 357 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02438 Spst-Chr1 33064520 33069487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02438 88 423 Organic Solute Cotransporters AT3G17430 75.148 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02438 - - gmx:100779373 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02438 1 33064520 33069487 Spst1g02438 1 33064520 33069487 ECH