Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02436 ATGGATGCTCATGAAGCTAGAGTCTTGCTCGGTTTCCCTCCCAATTCGCGTCCAACTCCGTCCCAGGTAAAATCAGCTTACAAGAAGAAGGTCTGGGAATCTCACCCAGACCGATTTCCATCACATGAAAAGCCTCTTGCTGAGTCTAAGTTTAAACTGATTTCAGAAGCTTACACATGCCTGCAATCTGGTGGGAGAGGACATTTTTCAGGTTCAGTTGAATATTCACATGTTGTGAGAAGTGGATTTCCGAGGGCTCATGGAGGAAGAAAAAATCGTGCAATGATTAAAGTCCCATTTGTTTTGATCATTCTGGGAACTGTTGTTCAAGGGCTTACAAAAAGCAAAAGGAGGAATACCCCTCACATAATCCATTTCTACCTTGATTTCTCCTCGACCAAGCCAGTAATGACCTATTTGTTGTAA 426 0.4296 MDAHEARVLLGFPPNSRPTPSQVKSAYKKKVWESHPDRFPSHEKPLAESKFKLISEAYTCLQSGGRGHFSGSVEYSHVVRSGFPRAHGGRKNRAMIKVPFVLIILGTVVQGLTKSKRRNTPHIIHFYLDFSSTKPVMTYLL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02436 141 SMART dnaj_3 4 66 IPR001623 -
Spst1g02436 141 PANTHER DNAJ HOMOLOG SUBFAMILY B 5 89 - -
Spst1g02436 141 ProSiteProfiles dnaJ domain profile. 5 79 IPR001623 -
Spst1g02436 141 CDD DnaJ 9 58 IPR001623 -
Spst1g02436 141 Gene3D DnaJ domain 3 66 IPR036869 -
Spst1g02436 141 Pfam DnaJ domain 10 62 IPR001623 -
Spst1g02436 141 SUPERFAMILY Chaperone J-domain 9 65 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02436 Spst-Chr1 33055951 33057305 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02436 - - ccaj:109795711 232.646