Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02430 ATGAAATCACCTAATGTGAAGGAGTTACTAGGAAATCCTCAATTTCCACAAAGTGCTCTGAAGGGATCCAGAGTGAGTGAGATGGAAGATTTTGCTAGGAGCTTGTGTGGTTGGAGTTGGGAGGAGAACAAATTGTTTGAGCTAGCTTTGGCAGTGGTGGATGAGCAACACCCTGAACGGTGGGAAGTGGTTGCAGCCATGGTTGGAGGAGAAAAAAGTGCAGGAGATGTTGAGGAACATTATGTGATCCTTCTGGAGGATTTACTGGTTATAGAATCTGGAAAACTGGATCATAAACTTGGAGAAGTTATGCCTGTTGTCCTTGTTGAGTGTAAGGAATCCATATGCTTGTCCCACAGTGATACAAGCATGTAA 375 0.4373 MKSPNVKELLGNPQFPQSALKGSRVSEMEDFARSLCGWSWEENKLFELALAVVDEQHPERWEVVAAMVGGEKSAGDVEEHYVILLEDLLVIESGKLDHKLGEVMPVVLVECKESICLSHSDTSM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02430 124 FunFam Transcription factor SRM1 31 98 - -
Spst1g02430 124 Gene3D - 37 84 - -
Spst1g02430 124 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Spst1g02430 124 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 33 96 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02430 Spst-Chr1 32976136 32976510 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02430 - - var:108327847 223.016