Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02402 ATGGATTCGATTTCGAATGTGAATGGTGCGAGGGTTAGGGATTTCATTGCTAAGGAAATTTCTGATTGGGACGCCGAAGTTAAGAATGACTGGTTTAATCGTGGAGGGTTAACCCCTCTGTGTCTTGATAATGTACTGGTTAGTGTGTATGAGTCACTACTCCTTCTCTTTGAGTTATGTGACATTACAAGAACTGTGGATCTTGCGGATCCATCGAGTGGGCGATTCTCCCAACTAGTTAGAAGAGTGAGTACCTTGATAACAAGACCAGCAGCTCCAGATATTATGGCTGAACAATGTGTCATCGTAACGGCTATGCTTAAGGATAAGGCTTCTGAAGTTGTCAAACATCTATCTGAGAGTCACTGGAATTCGTCTTGTATGGTCACAATGAAGAAATTTCAGGACGTATGTGGAGGGCAGGATGAGGCCTCTGTAATATTGAGGTATATGTCTGGGTGTAGAACAGCACAGTATCTGTCAGTGAACAAGAAAGATTTTATAGAGGGAGTAAAAGTTTCTCTTTCAGCTGGAGCATTATCTAGTATGACTGATTTAGATTATGATGTATTGCACCTGATTTGGACAACTGAGAAGCTCCAGCAGCAACTGGATGTGACTGACAAGCGTTATGAATTGTTGAGAAAATCAGCATTGGCTTCTCTGCAATCTGGGAAGAAAAAAATGGCCCTTAGCTATGCAAGGGAGCTGAAGTTAGTCACCCAGAGTAGAGAAAAATGTTCATCACTTTTGAACAGAGTAGAGGAAGTACTTGGTGTTATTGCTGATGCCGAGTCAACAAAAAAGGTTGCTGAAGCTATGCAGATTGGAGCTCGAGCTATTAAAGAAAATAAGATCAGCGTGGAAGATGTTGATCTTTGTCTAAGAGATATCCAAGAGAGCATTGATTCACACAAGGAAGTTGAAAAGCTGCTAGAACAAACGCCATCATACGTGGATTTTGAGGATGAAGATATTGAAGAGGAATTCAAGAAGTTGGAGTTGACTGTTGGGAAAGAGGCTCAAGTTCCTACCCCGGAGAAGACAATTAAAGCAGAGGGAAGAACAGCTTCTGAGGCTGCTGATTTTATTAGCAATGCTTTCTCAAATCTCAACCTTTCTGACCATCCAGCTGGGAAGCCAGGAATTACTCAGTTGGTGTCAGATGGAGACAAAATAACAAAAAAATTACAAATGGAAGCTGTGTAA 1209 0.4144 MDSISNVNGARVRDFIAKEISDWDAEVKNDWFNRGGLTPLCLDNVLVSVYESLLLLFELCDITRTVDLADPSSGRFSQLVRRVSTLITRPAAPDIMAEQCVIVTAMLKDKASEVVKHLSESHWNSSCMVTMKKFQDVCGGQDEASVILRYMSGCRTAQYLSVNKKDFIEGVKVSLSAGALSSMTDLDYDVLHLIWTTEKLQQQLDVTDKRYELLRKSALASLQSGKKKMALSYARELKLVTQSREKCSSLLNRVEEVLGVIADAESTKKVAEAMQIGARAIKENKISVEDVDLCLRDIQESIDSHKEVEKLLEQTPSYVDFEDEDIEEEFKKLELTVGKEAQVPTPEKTIKAEGRTASEAADFISNAFSNLNLSDHPAGKPGITQLVSDGDKITKKLQMEAV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02402 402 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 164 345 IPR005024 GO:0007034
Spst1g02402 402 Pfam Snf7 196 343 IPR005024 GO:0007034
Spst1g02402 402 Gene3D - 193 348 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02402 K15053 - gmx:100783674 610.527