Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02389 ATGTTGCGCCTGAAAGCGTTTCGGCCAACGACCGACAAAATCGTTAAGATCCAATTACATCCGACGCATCCATGGATGGTTACCGCCGATGATTCAGATCGAGTTTCAGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGCGGAGTGGACGAACGGCGTTTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGAAACAGGTTTTGGAAAGTCCAAAGGGAAGCCTACAGAAGCCATTCGGGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGTCATAATCGCTCTGCAGCTGCTGAGGCTCCAACAGCTGTCCATACTTCAGCTTTTAGCTCTCCGGCCCCATCGACAAAAGGGAGACATTTTCTAGTCATATGTTGTTTAAACAAAGCAATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAACTTGATAACAAGTCCCTTCTATGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTCGTTGCTTTTGGTGCATCAGATGGTGTCATTCGAGTTCTCTCAATGATGACATGGAAGCTTGTGAGAAGGTACACTGGAGGTCATAAAGGATCTATCTCCTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGAAAAAGCCTTCAGTTCAGGCTCTTCTGGTTTCTGGTGCTAGTGATGGATTGCTCATTATTTGGAGTGCTGACCACGGGCAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTAATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACTGTCTCCTTTAAGCATGAAAGTGCCTTTGATCCTCAGGAGCTGCGGCGTATAAAGCCAGTTCCCAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACGAGGCCGTTGTGTGAATTGACCTCAGTTATTCCTCCAAACGCCCTTGCTCCTAATAAGAAATTGAGGGTGTATTGTATGGTTACACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCTCTACCAACTCCAGCAGACAGTAGAGAGCATTCTGCCGTATTTGTAATTGAAAGGGAATTGAAGCTATTGAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGATTTTTTTGAATCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACTCCTGTTCCTCATGATTCGTATTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTGTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGGCTTCTCGCATGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAGCAGCACCTCCTAGAATTCCTGTAATACCCAAGGGTAGTTCATCAAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCTTCCACAGCTTCTGTTCAAGTCCGCATCTTGTTAGATGATGGTACATCAAATATACTGATGAGATCTGTTGGCGCACGAAGTGAACCAGTCATTGGATTACGTGGAGGAGCACTGCTCGGTGTCGCCTATCGAACATCCAGGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAATTCAGTCTATGCCCTTGTCAGGCTATGGAAGCAGTGGTCTTTCTTCTTTTACTACTATTGATGATGGATTTTCTTCAAATAGACCTCCAACCTCTGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCAGTGGGGGACCTTCTTCCTCACCCTGAATGGACTGCTTGGGACCAAACTGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTCCTTGCGCCCTCAATATAGATATTTGGGAGATGTTGCAATCCCATTTGCTACCAGTGGTGTTTGGCACAGGAGGCAACTGTTTGTGGCTACCCCAACTACAATAGAAATTGTTTTTGTGGACGCTGGGGTTGCGCAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAGAAAATGAAAGCAGCACAGGCAAGAGCTGTTGCAGAGCACGGAGAGTTAGCATTAATTACTGTAGAAGGTCCCCAGTCTGCTAAAGAAGAAAGAATAGCGTTGAGGCCACCGATGTTGCAGGTTGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTACCACCTTTCTTAACATTACCAAAACAATCTAGAGTTGATGGTGATGATTCTTGGATGGCAACAGAAGAAAGAAAGGCAGGTGAGGTGGCAGTTGGTGGTGGGGGTGTGTCTGTGGCAGTGACTCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGCCCTCTTGTAGTTGTAGGTGTCAGGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGCTGTCGATGCCTTGCTGCTTACGGAGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACATCATGATGATTTAGCACAATTTATGTTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAAAGCAATGATTTGAAAAGAGCTCTGCATTGTCTTCTTACCATGAGTAATAGCAGGGATATAGGAAATGATGGTACTCCTGGGCTTGGTTTGAATGACATTCTTAATTTATCAGAAAAAAAACAAGAGAAAGTATCAGATAAAAAACAAGATATTGTTGAAGGTGTTCAGGGTATAGTGAAATTCGCGAAAGAATTCTTGGATCTTATTGATGCTGCAGATGCTACTGCACAGAGTGAAATTGCCCGTGAGGCTCTCAAGAGGTTAGCTGCAGCAGGTTCGGTGAAAGGTGCTTTACAAGGTCATGAATTGAGAGGATTAGCATTACGTCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTTTGGTTAACAACTTAGTCACGCTTGGCTTGGGACGTGAAGCTGCATTTGCTGGTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTGCATGCTCATGCACATGGACGTCCAACTTTGAAGAACTTAGTGCAGGCTTGGAACCAAGCGCTACAGAGAGAGATTGAACCTACTCCATCTCAGAAGACAGATGCTGCAGCTGCGTTTTTAGCCTCTCTTGAGGAGCCTAAGCTCACGAGTTTGGCAGATGCTGGGAAGAAACCGCCTATTGAAATCCTGCCCCCGGGGATGATGTCTCTTAATGCTCCTATCTCCATCCAGAAAAAACCAGCTTCTGCTGCACAGAATTCGCAACAACCCCCAGACAAGCCATTGGCACTGGAAGCACCTCCTACAACCACAGTTGCACCAGAACAGCAGCCTGAATCCATACCTGCATCAGTTAATGAGCCACCTCCGTCAGAGGCTACCTCAGACTCCACGCCAGTAGCTCCTGTAGCTGCTCCACCTCAACCAGAATCAGGTGAAACCACAGTAGATGATGGAGTTCCCACCACTGGACCAGCTAGTGATGGAGATACCAATGTTGGTGGTGAAACTGGTCAAGCAGCAGCGTCTACTGGCAATCCAGCACCCCCAGAGGTCCCCCCACCTCCAGTACCAGGAGAGGTTTTGGAGACGTCTGCTCCAAGTTCAGCTGCAGTTCCTACAACAACTACAGTTCCTGCAAATGATCCCTTTATATGA 4077 0.4614 MLRLKAFRPTTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETGFGKSKGKPTEAIRGGSVKQVNFYDDDVRFWQLCHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEKKPSVQALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKHESAFDPQELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPNALAPNKKLRVYCMVTHTLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPADSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFESLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESAAPPRIPVIPKGSSSKRAKEAAAAQAAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARSEPVIGLRGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGLSSFTTIDDGFSSNRPPTSAAPQNFQLYSWETFQPVGDLLPHPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPFATSGVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKEEQKMKAAQARAVAEHGELALITVEGPQSAKEERIALRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDGDDSWMATEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGNDGTPGLGLNDILNLSEKKQEKVSDKKQDIVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKPPIEILPPGMMSLNAPISIQKKPASAAQNSQQPPDKPLALEAPPTTTVAPEQQPESIPASVNEPPPSEATSDSTPVAPVAAPPQPESGETTVDDGVPTTGPASDGDTNVGGETGQAAASTGNPAPPEVPPPPVPGEVLETSAPSSAAVPTTTTVPANDPFI 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02389 1358 Gene3D - 233 437 IPR015943 GO:0005515
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1243 1271 - -
Spst1g02389 1358 Gene3D - 921 1178 - -
Spst1g02389 1358 PANTHER TSET COMPLEX MEMBER TSTF 1 1272 - -
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1320 1334 - -
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1217 1358 - -
Spst1g02389 1358 SUPERFAMILY WD40 repeat-like 7 529 IPR036322 GO:0005515
Spst1g02389 1358 SMART WD40_4 201 250 IPR001680 GO:0005515
Spst1g02389 1358 SMART WD40_4 1 39 IPR001680 GO:0005515
Spst1g02389 1358 SMART WD40_4 259 301 IPR001680 GO:0005515
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1340 1358 - -
Spst1g02389 1358 Gene3D - 4 232 IPR015943 GO:0005515
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1217 1232 - -
Spst1g02389 1358 MobiDBLite consensus disorder prediction 1288 1317 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02389 - - gmx:100786844 2336.22