Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02369 ATGTCTTCCACCACCCACAACCACATCCACGAAAACAACCACCACAACGGTTCTCACGTAGCCAAAAAACCCAACCTTTCCACCTCCGTTATAACTGCGTCGGAAATCAAATCCGAATTCGCCCACCACGACGCCTCCGTCGCGCGTATCAACAACGGCAGCTTCGGCTGCTGCCCCGCCTCCATCCGCGCTGCGCAGCACCGCTGGCAGCTCCAGTACCTCCGCCAGCCTGACCACTTTTACTTCAATGAGCTCAAAACCGGCATCCTCCAATCTCGAACCCTAATCAAGGACCTCGTCAACGCCGACCACGTCGACGAGATCTCTATCGTCGACAACGCCACCACCGCCGCCGCCATTGTCCTCCAGCACACCGCATGGAACTTCCGCGAAGGAAGGTTTCAGAAAGGCGACGTTGTCCTCATGCTCCACTACGCGTACGGCGCCGTTAAGAAATCCATGGAAGCGTACGTCACACGCGCCGGAGGTAACGTTGTCGAGGTTCCCCTCCCTTTCCCCGTAAACTCCAATGACGAGATCGTTTCTGAGTTTAGGAAGGCATTGGAGAGAGGAAATAGTAACGGAAAAAGGGTTAGGTTAGCGGTGATTGATCACGTCACTTCCATGCCGTGTGTGGTTATTCCTGTTAAGGAGTTGATTCAGATTTGCAGGGAGGAAGGGGTGGACCAGGTTTTTGTCGACGCTGCACATTCCATTGGGTGCACTGATGTTGATATGAAGGAAATTGGTGCTGATTTTTACACTAGTAATTTGCATAAGTGGTTCTTTTGTCCTCCTTCAATTGCGTTTTTGTATACTCGTAGGAACCTTAAGGGTTCTGTTTCTGGTTCTGATTTGCATCACCCTGTGGTGTCTCATGAGTATGGCAATGGCTTGGCTGTGGAGAGTGCTTGGATTGGAACCAGGGATTATAGTGCTCAGTTGGTTGTTCCTGCCGCGGTGGAGTTTGTTAACCGGTTTGAAGGAGGTATTGAGGGGATCAAGAAGAGGAATCATGAGGCTGTTATGGAGATGGGGGAGATGCTGGCGAAGGCTTGGGGGACTCATCTCGGGAGTCCGGCGGATATGTGTGCTAGCATGGTTATGGTTGGCTTGCCTCCTTGTTTGGGGATTGGAAGCGATTCTGATGCTCTCAAGTTGAGGACACATTTGAGGGATGCTTTTGCGGTTGAGGTTCCGTTATATTATCGGCCGCCAAGAGAAGGGGAAGTTGGGGTGGTTACTGGGTATGCGAGAATTTCTCATCAAGTGTATAACAAAGTTGATGACTATTACAAGTTCAGGGACGCCGTTAACCAACTTGTGCAAAATGGGTTCACTTGTGCTGATCTTTCGGATTGA 1362 0.5088 MSSTTHNHIHENNHHNGSHVAKKPNLSTSVITASEIKSEFAHHDASVARINNGSFGCCPASIRAAQHRWQLQYLRQPDHFYFNELKTGILQSRTLIKDLVNADHVDEISIVDNATTAAAIVLQHTAWNFREGRFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGNSNGKRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRRNLKGSVSGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAAVEFVNRFEGGIEGIKKRNHEAVMEMGEMLAKAWGTHLGSPADMCASMVMVGLPPCLGIGSDSDALKLRTHLRDAFAVEVPLYYRPPREGEVGVVTGYARISHQVYNKVDDYYKFRDAVNQLVQNGFTCADLSD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02369 453 SUPERFAMILY PLP-dependent transferases 39 443 IPR015424 -
Spst1g02369 453 Pfam Aminotransferase class-V 83 368 IPR000192 -
Spst1g02369 453 Gene3D - 59 326 IPR015421 GO:0003824
Spst1g02369 453 PANTHER L-CYSTEINE DESULFHYDRASE 11 449 - -
Spst1g02369 453 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02369 Spst-Chr1 32272154 32273515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02369 K22207 - gmx:100786129 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02369 1 32272154 32273515 Spst1g02369 1 32272154 32273515 ECH
Spst1g02369 1 32272154 32273515 Spst10g01802 10 18393146 18394468 PCT