Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02360 ATGGCGAGGAAGAAGATCAGAGAGTACCATTCGAAGAGGCTTCTCAAGGACCACCTCAAACGTCTCGCCTCGATTGACCTCGATATCCTTTCTGCTCAGGTCATACAGTCAACGAACTTTGCTGACTTGACAGGCCAGCATCCGTGGTTGTCGTCAACCAAGTTGGTCGTGAAACCGGACATGCTCTTTGGGAAGCGCGGAAAGAGTGGTTTAGTGGCTCTCAATTTGGACATAGCTGAAGTCGCTGAGTTCGTTAAAGCACGCCTCGGCGTTGAGGTTGAGATGGGAGGTTGCAAGGCGCCTATAACTACTTTCATTGTTGAACCGTTTGTTCCTCATGACCAAGAATATTATTTGTCCATTGTTTCTGAAAGGCTTGGTTCCACCATCAGCTTCTCCGAATGTGGGGGCATCGATATTGAAGAGAATTGGGATAAGGTTAAAACTATTTTCCTTCCAACAGAAAAACAGATGACTCCGGAAGCATGTGCACCCTTGATTGCTACACTTCCTTTGGAGATTCGGGGGACAATAGGTGATTTCATACTGGGTGTGTTTGCTGTCTTCCAAGATCTGGACTTCAGTTTTCTTGAAATGAATCCATTTACATTGGTGAATGAAAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGCAATATAGGGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTCATTCATTCATTGGATGATAAGACAAGTGCATCGTTAAAATTTACTGTATTGAACCCAAAAGGACGCATCTGGACAATGGTAGCTGGTGGTGGTGCAAGCGTAATTTATGCTGATACTGTTGGAGATTTAGGATATGCCTCAGAGCTTGGCAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAGGTGCTGCAGTATGCAAGGGTCGTAATTGATTGTGCTACTGCAGACCCTCATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATAGCAAACTTCACGGATGTTGCTGCCACATTCAGCGGAATTATTCGGGCCCTGAGAGAGAAGGAATCAAAGCTTAAAGCAGCGCGAGTCCACATCTATGTCAGAAGAGGTGGTCCAAACTATCAGACTGGTTTGGCAAAGATGCGTGCATTGGAGGAGGAACTGGGGGTACCACTTCAGGTTTATGGACAGGAGGCCACAATGACCGTATCTGCAAAGAAGCGATCGATTGCATCATGTCCGAAGCATAACGCAGAGTAA 1281 0.4629 MARKKIREYHSKRLLKDHLKRLASIDLDILSAQVIQSTNFADLTGQHPWLSSTKLVVKPDMLFGKRGKSGLVALNLDIAEVAEFVKARLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIDIEENWDKVKTIFLPTEKQMTPEACAPLIATLPLEIRGTIGDFILGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGNIGFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPHGRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAARVHIYVRRGGPNYQTGLAKMRALEEELGVPLQVYGQEATMTVSAKKRSIASCPKHNAE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02360 426 Gene3D - 1 233 - -
Spst1g02360 426 Pfam ATP-grasp domain 6 203 IPR013650 -
Spst1g02360 426 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 388 IPR005809 GO:0006099
Spst1g02360 426 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Spst1g02360 426 Gene3D - 240 421 IPR016102 -
Spst1g02360 426 SUPERFAMILY Succinyl-CoA synthetase domains 259 403 IPR016102 -
Spst1g02360 426 FunFam ATP-citrate synthase alpha chain protein 240 420 - -
Spst1g02360 426 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
Spst1g02360 426 Pfam ATP citrate lyase citrate-binding 241 410 IPR032263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02360 Spst-Chr1 32218296 32221835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02360 1 414 Acyl Lipid Metabolism Gene Families AT1G09430 86.232 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02360 K01648 - gmx:100787551 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02360 1 32218296 32221835 Spst1g02360 1 32218296 32221835 ECH