Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02349 ATGGGTAATGGCTTTGCATTCTCAGTTCTCATTTTCACTGCAATCGGAATAGCAATGGCAATTCCATTGGGTGACTGTGTTAACCCACCGGTGGTGTTTGTCTTCGGCGATTCCAACTCGGATACTGGTGGACTCGCTTCTGGACTCGGTTTCCCTATCAATCTTCCCAATGGCCGCACTTTCTTCCGCAGATCCACTGGTCGATTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTGCCATACTTAGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCTAAGTATGTTCCTTTCTCCTTAAATATACAGGTCATGCAGTTCCGGCATTTCAAAGCTCGTTCTCTTGATCTTGTTACGGCAGGTGCAAGAAATTTCTTCAATGACGAAGGCTTCCGTAATGCACTCTACTTGATTGATATTGGGCAAAACGACATTGCTGATTCATTTGCCAAAAATCTGTCATACGCTCAAGTCATAAAAAAGATCCCATCCTTTATAACTGAGATTGAAAATGCTATTAAGAATTTACATAATGAAGGTGCCAGGAAGTTTTGGGTTCACAATACTGGGCCACTGGGCTGTCTTCCAAAAATACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGCTATAACTCTGCTGCTAGATTATTTAATGAAGCGCTGCTTCATTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTCTAGTCTATGTTGATATTTATGCCATTAAGTATGACCTCATCACAAATGCCGCAAAATATGGTTTTTCAAATCCGTTGATGGTATGTTGCGGCTTTGGGGGGCCTCCTTACAACTTTGACGCAAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCAAACTGAAGCTGCAAATACGATGATAGCTTCCAAGATACTTTCCATGTCTTATTCCACTCCGCGGACATCTTTTGATTTCTTCTGCCACCACTAA 1086 0.4337 MGNGFAFSVLIFTAIGIAMAIPLGDCVNPPVVFVFGDSNSDTGGLASGLGFPINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRHFKARSLDLVTAGARNFFNDEGFRNALYLIDIGQNDIADSFAKNLSYAQVIKKIPSFITEIENAIKNLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEALLHLSQKLRSELKDSTLVYVDIYAIKYDLITNAAKYGFSNPLMVCCGFGGPPYNFDARVTCGQPGYQVCDEGARYVSWDGIHQTEAANTMIASKILSMSYSTPRTSFDFFCHH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02349 361 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Spst1g02349 361 Gene3D SGNH hydrolase 28 349 IPR036514 -
Spst1g02349 361 SUPERFAMILY SGNH hydrolase 32 345 - -
Spst1g02349 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Spst1g02349 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 349 - -
Spst1g02349 361 FunFam GDSL esterase/lipase At1g09390 20 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02349 Spst-Chr1 32113727 32117368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02349 30 343 Acyl Lipid Metabolism Gene Families AT4G10950 26.364 1.45e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02349 - - gmx:100797617 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02349 1 32113727 32117368 Spst1g02349 1 32113727 32117368 ECH