Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02345 ATGGCAAGACTGGTGGCACTTCAACTGAACCAACTATCTTTCTCTCCATTGGCCTCCTCTCTTTCTGACTTCAGCGGAACCAGACTTCAAAACCAACTTCAGTTGAAGAGAACCTTCAGGCAGCCAAAAGGGTCTTTCTATGTCTCTGCATCAAGCACCAAGAAAATCCTTATCATGGGAGGCACCAGGTTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGTAAAGCGCCTGTCACTCAACAATTGCCTGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTTCGAGTTTGTAAAATCCAGTCTCTCAGCAGAGGGGTTTGATGTTGTTTATGACATAAACGGACGAGAGGCAGATGAAGTTGAGCCCATATTGGATGCTCTGCCTAATCTGGAACAGTTTATTTACTGTTCTTCCGCTGGTGTCTATCTTAAATCTGATCTATTACCTCATGCAGAGACTGATGCAGTTGATCCTAAGAGTAGGCACAAGGGAAAGCTTGAGACAGAAAGTTTGCTACAATCAAAGGGTGTAAATTGGACTTCTATAAGGCCAGTGTATATCTATGGACCCTTGAACTATAACCCTGTTGAAGAGTGGTTCTTCCATAGATTGAAAGCTGGTCGCCCAATTCCTATCCCTAGCTCAGGATTACAAATAACTCAACTCGGTCATGTTAAGGATTTGGCAATAGCTTTTGTTAAGGTTCTTGGTAATGATAAGGCCAGCAAGGAAGTATTCAACATCTCGGGAGAGAAATATGTCACATTTGATGGATTAGCAAGAGCATGTGCTAAGGCTGGTGGATTCCCGGAGCCCGAGATCGTTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGTCATTTCCATTCCGTGACCAGCATTTCTTTGCATCAATAGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCTGAATTTGACCTTGTAGAAGGTCTTGCAGACTCGTATAACCTGGACTTTGGTAGAGGAACATTCCGGAAAGAGGCTGATTTCTCAACTGATGACATTATTCTTGGCAAGAGTCTTGTTAGTGTATAA 1137 0.4274 MARLVALQLNQLSFSPLASSLSDFSGTRLQNQLQLKRTFRQPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKDFEFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKDLAIAFVKVLGNDKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVSV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02345 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 53 360 - -
Spst1g02345 378 FunFam Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 52 351 - -
Spst1g02345 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
Spst1g02345 378 CDD SDR_a1 54 307 - -
Spst1g02345 378 Gene3D - 51 351 - -
Spst1g02345 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02345 Spst-Chr1 32061062 32064700 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02345 - - gmx:100799721 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02345 1 32061062 32064700 Spst1g02345 1 32061062 32064700 ECH