Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02342 ATGGCTAATGCAATTGTAATGCCGAGTTTTCTGCCACGACCCTTTACCCAGACGACGCCGTTGCAGCTGCCCACTCACACTCACTCCTTCCAATCCCCTCGCTCCTCCCTCTCCCTCACAACCCAATCGGCTAAAGGTTTTGCAGTTCCAAGAAGGAAAGCAATGTCCTTGATCTTATCAACTTACATTCTCTCAAAGGTCGATGTAGCACTGGCTCAACAGTCTCCTGTGTTCCGCGAATACATTGATGCGTTTGATGGTTATTCATTCCAGTACCCAGGGAGTTGGATTCAAGTCCGTGGTGCTGGGGCTGACATATTCTTCAGGGACCCCTATGTTCTTGATGAAAATCTATCGCTTGAAATTTCTTCACCATCATCCTCCCAATACAAGAGTGTTGAGGACTTGGGTCCACCCCAAGAAGCTGCAAAGAAAGTCCTCAAACAGTATCTGACTGAGTTTATGTCTACTAGACTTGGTGTTAGACGTGAATCAAATATTCTTTCAACTTCTTCAAGAGTAGCCGATGACGGCAAGTTATACTATCAAGTTGAGGTAAACATCAAGTCATATGCCAACAACAATGAACTTGCTGTAATGCCACAAGACCGGGTAGCACGTCTGGAATGGGATCGTAGGTACCTATCTGTTCTTGGGGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCAGAAAATGTGTTTGCAGAGGAGGAAAATGATCTTCGTAGAATCATGGATTCGTTTCGAGTAAACAAGACTGCCGGTTAG 777 0.453 MANAIVMPSFLPRPFTQTTPLQLPTHTHSFQSPRSSLSLTTQSAKGFAVPRRKAMSLILSTYILSKVDVALAQQSPVFREYIDAFDGYSFQYPGSWIQVRGAGADIFFRDPYVLDENLSLEISSPSSSQYKSVEDLGPPQEAAKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPENVFAEEENDLRRIMDSFRVNKTAG 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02342 258 NCBIfam photosystem II reaction center PsbP 54 253 - -
Spst1g02342 258 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 72 253 - -
Spst1g02342 258 PANTHER - 34 253 - -
Spst1g02342 258 Pfam PsbP 78 253 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Spst1g02342 258 SUPERFAMILY Mog1p/PsbP-like 79 253 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02342 - - gmx:100792664 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02342 1 32049450 32051499 Spst1g02342 1 32049450 32051499 ECH