Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02338 ATGTCTCTGCAACCTGGTTCGAGTTCTGGTTCTCCTTTGGAGGGGGCGGGGAGGAAAAGCAATAAGATTGGGCGTGTGACAGAAGAGAGTCGGAAAATGAGGGAAGAAAACATGATTCGCATGAGAAAAACAGAACCCCAAAATATTCTTCTCCGTAAACGAATTAACATTTCTGGGTTGAATCATCAGTTGATGGAAGCTCTTCCTGAGATAATTGAACGTGTATGTGCTGAGTACCCTGACCATCGATTGGAGGTCAATGAACACTTTAGAAGGTTAACAGTTGGTGAAGAAGTACCAGTTGATGAGGTCCTTAAGAAAGGTATTCTCCCTCACTTGGTGGGGTTCTTGTCAAGGGACGATGCACCCCAATTGCAGAGAGAAGCTCTATGGATAGTATCCAACTTTAACTTTGCTTCCGGAACATCCCAACAAATAACAGCTATCGTTGAACTTGGTGTTGTTCCTCCCTTGGTCAATCTTCTCTCTAGTACCGATGAGGATACCAGAGAAGAGGTCGTCTTCTGGAACATTGTTCGTGATTCCGCAAACAATAGGGATCTTGTTCTTAACCATGGTGCTCTCATGCCAATATTAGGTCATTTGCAACCACAATCAAAATTGTCTATGTTGAGACTTGCTTCGTGGTGTTTATCTCTTTTGCTCCGTGGAGAGCCTCCAGTTAGTCTTGAACAGATAAAGCCTGCCTTACCTGTTCTTCAGCGACTCGTCCACATGACCGATGAAGAAATTTTAACAGATACATGCTGGGCTCTCGCTTACTTTTCAGTAGGTGAAACCGAGAGAAGTCAAGCTATTCTTGATCTTGGAATTTGCCCTAGACTTTTGGAGCTTCTTCAGCATCCATCAGATACGATTACTCTAACCGTGCTTCTGTTTTTTGGAAATATCGTCACTTACAATAATGGTCCCCAAACACGGTTTTTGATTGATATCCAATTGCTCCGGCGTCTTCGACGAGTTCTTATGCGTGAATATAACAAAAGCATCTTTAGAGAAGCTTGTTGGACAATCTCAAATATCGCATCTGGGCATAGAGATCAATTTCAGGTTGTGATTGATGCCAATATTATTGATTCTGTTGTTAAAGTTGTTCATAATGCTGGGTTTGAGGTCAAGATAGAGGCTGCCTGGGTGATCTGCAATATCACTTTTGGAGGATATACTGACCACATCAGGTACCTTGCGGCTCATGGTTGCATTGAAGCACTGTGTGAACTCTTGACCTATTCAGACCTAGCGATTGTGAGGGTTTGTCTCTTGGCGCTGGACAGCATTTTGGGAGTTGGAGAAAGTGACAGGAATGATAGAGGCAATAGTTTTGCTAAAAGGGTTGAGCAATGTGGAGGATTAGATAATATTGAAATGTTGCAGACTCACGACAACAACGAGATTAGTAAGACAGCTACGTTGATTTTGGTTTCATATTTTGCTGAGGCTGAGATGGACGAATGA 1476 0.4282 MSLQPGSSSGSPLEGAGRKSNKIGRVTEESRKMREENMIRMRKTEPQNILLRKRINISGLNHQLMEALPEIIERVCAEYPDHRLEVNEHFRRLTVGEEVPVDEVLKKGILPHLVGFLSRDDAPQLQREALWIVSNFNFASGTSQQITAIVELGVVPPLVNLLSSTDEDTREEVVFWNIVRDSANNRDLVLNHGALMPILGHLQPQSKLSMLRLASWCLSLLLRGEPPVSLEQIKPALPVLQRLVHMTDEEILTDTCWALAYFSVGETERSQAILDLGICPRLLELLQHPSDTITLTVLLFFGNIVTYNNGPQTRFLIDIQLLRRLRRVLMREYNKSIFREACWTISNIASGHRDQFQVVIDANIIDSVVKVVHNAGFEVKIEAAWVICNITFGGYTDHIRYLAAHGCIEALCELLTYSDLAIVRVCLLALDSILGVGESDRNDRGNSFAKRVEQCGGLDNIEMLQTHDNNEISKTATLILVSYFAEAEMDE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02338 491 PIRSF Importin_alpha 13 491 IPR024931 GO:0005737|GO:0006606|GO:0061608
Spst1g02338 491 Gene3D - 64 485 IPR011989 -
Spst1g02338 491 MobiDBLite consensus disorder prediction 1 15 - -
Spst1g02338 491 SUPERFAMILY ARM repeat 27 486 IPR016024 -
Spst1g02338 491 MobiDBLite consensus disorder prediction 1 33 - -
Spst1g02338 491 PANTHER IMPORTIN ALPHA 27 486 - -
Spst1g02338 491 Pfam Armadillo/beta-catenin-like repeat 100 135 IPR000225 GO:0005515
Spst1g02338 491 Pfam Armadillo/beta-catenin-like repeat 143 173 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 96 138 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 225 264 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 142 180 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 181 223 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 352 392 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 266 306 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 395 435 IPR000225 GO:0005515
Spst1g02338 491 SMART arm_5 308 350 IPR000225 GO:0005515
Spst1g02338 491 Pfam Atypical Arm repeat 446 488 IPR032413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02338 Spst-Chr1 32027064 32030048 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02338 K15042 - sly:101253727 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02338 1 32027064 32030048 Spst1g02338 1 32027064 32030048 ECH