Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02307 ATGATAGCTCTTCTACTTTTTGTACTAACTAGTCTTGGTTTTGTAATCAATGCATCAACCCTTAATTCTTGTTCGAATTGTGGAGACTCTGTTGTTCCATACCCTCTCAGCACAACTGAGAATTGTGGAGATAAAAGGTATCAAATCTACTGCAATGATGATGAGTTGGAGTTCCTTTCAGCAACAGGAACTTACTATAAGATCCTTAGAATTGACCCAAGTGCTAATAGGCTTGTCATTAGCCCACCCCTCATTTTAAAAAATACCTGTTATTCTTCTGATCTCTCCATGGGAGGCCTTGTGCTTGATGAAAACTTGCCTTTCAATATATCTGCACAAAATACAGTAATGCTGTTCAATTGCTCTAACAATATCCTTCAGTCTCCACTCAATTGTACTTCAAATAGTATCTGCAGGCAATTTGAGAAAAAGGTGGAAGAAGGATCTGGGTGTATGGGCACCCTTTGTTGTCATTACTTAAAGGACTCAGCCATGAATTCTCATAGGATCAGAGTCAAGGTTGGGAGTTGCACTGCCTACACTTGTTTGGTGCGTTTCACTCCTGATGATCCTCTTGAAACTTGGAATTATGGGATTGAGATACAATGGTCACCTCCCAATTGA 624 0.3974 MIALLLFVLTSLGFVINASTLNSCSNCGDSVVPYPLSTTENCGDKRYQIYCNDDELEFLSATGTYYKILRIDPSANRLVISPPLILKNTCYSSDLSMGGLVLDENLPFNISAQNTVMLFNCSNNILQSPLNCTSNSICRQFEKKVEEGSGCMGTLCCHYLKDSAMNSHRIRVKVGSCTAYTCLVRFTPDDPLETWNYGIEIQWSPPN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02307 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 80 IPR025287 GO:0030247
Spst1g02307 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02307 Spst-Chr1 31784690 31785313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02307 24 207 Receptor kinase-like Gene Family AT5G02070 38.743 2.31e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02307 - - tpra:123890956 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02307 1 31784690 31785313 Spst1g02307 1 31784690 31785313 ECH