Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02299 ATGAAGCTCGACGTAGATGTGTTGAGATATCTGTCCAAAGATGATTTTAGGGTTCTCACTGCCGTTGAATTGGGCATGAGGAATCATGAAATCGTACCAACGGAACTCATCGACCGAATTGCTCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAGAATTTGCTCAAGAACAAGTTGTTGCATCATGACTCTTCTAAATATGATGGATTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAAACTATGGTGAACAAAGGAGTGTTTGTTGCTGTTGGTCGCCAGATTGGTGTTGGAAAGGAATCTGATATATTTGAGGTTGCTCGTGAAGATGGAACTGTTCTAGCCATGAAGTTGCATAGGCTTGGTAGAGTCTCTTTTAGAGCTGTCAAATCTAAGCGTGACTACTTGAGACATCGCAGTAGTTATAATTGGCTCTATTTGTCTCGCCTTGCCGCACTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACCCATGGCTTTCCTGTTCCAAATGCTGTAGAACACAATAGACATTGTGTAGTCATGTCACTTGTCCAAGGTTACCCTCTTGTTCAGGTCAAGCAGTTACAGAATCCAGAGACAGTTTTTGAGACAATTATTGGTCTAATTGTTCAGTTGGCTGAGCGTGGCCTTATCCATTGTGATTTCAATGAATTCAATATCATGATTGACGATGATGAAAAAATTACCATGATTGATTTTCCACAAATGGTATCTGTGTCACACCGAAATGCACAGATGTACTTTGACCGCGATGTTGAATGCGTGTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTGAAGAAACCTTAGATGATATTGATGGTTCTGATGAGGGGAGAGATGAAGCTGGAAAACCCTGTTTTTCTGCAATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAACTTGCTGCCAGTGGCTTTACTAGAAAGGATGAAGAAGATATTCAAAGGTTCATTGAGGGCGGGGCAGAGAGTGATACCAATTCAGATAGTGAAGAGGTTGACTTAGTAGAAGACCTTAATGAAGCAGGCACTGTAGATGGTGATTCTTCAGACTTGTTGGAACAGAATGAGGGATATGAAAGTCAGGGGAAAGAGGAGAGTTGTGAAGCACGTGAAAGCAGTGGATCGGAAAAGCAAGATGCAAGTGACAATGAGGAAAACAATGAAGAAGCGATGGAAAATGAAGCTGAACTCGTTAAGAGCTTGAATAAGCAAAGACGACGTGCTGTAGCAGCAGCTCGTAAGGGGCGGAAGACTGTCGCAGCCAGAAATTCCTACAAAGACAAGGGTGGTAGGTCATCTCACAATTCTAAAATCCAGAAACAGCTGAGCAGCTGGTGA 1383 0.4194 MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPTELIDRIARLKHGGTYKVLKNLLKNKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAVEHNRHCVVMSLVQGYPLVQVKQLQNPETVFETIIGLIVQLAERGLIHCDFNEFNIMIDDDEKITMIDFPQMVSVSHRNAQMYFDRDVECVFKFFRKRFNLSFEETLDDIDGSDEGRDEAGKPCFSAIERSAGFLDRELAASGFTRKDEEDIQRFIEGGAESDTNSDSEEVDLVEDLNEAGTVDGDSSDLLEQNEGYESQGKEESCEARESSGSEKQDASDNEENNEEAMENEAELVKSLNKQRRRAVAAARKGRKTVAARNSYKDKGGRSSHNSKIQKQLSSW 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02299 460 Gene3D Phosphorylase Kinase; domain 1 93 190 - -
Spst1g02299 460 CDD RIO2_C 94 274 IPR030484 GO:0004672
Spst1g02299 460 MobiDBLite consensus disorder prediction 372 396 - -
Spst1g02299 460 Pfam RIO1 family 106 279 - -
Spst1g02299 460 MobiDBLite consensus disorder prediction 435 449 - -
Spst1g02299 460 SUPERFAMILY "Winged helix" DNA-binding domain 5 90 IPR036390 -
Spst1g02299 460 Gene3D - 1 90 IPR036388 -
Spst1g02299 460 SUPERFAMILY Protein kinase-like (PK-like) 95 270 IPR011009 -
Spst1g02299 460 FunFam Serine/threonine-protein kinase RIO2 1 91 - -
Spst1g02299 460 Coils Coil 399 422 - -
Spst1g02299 460 FunFam Serine/threonine-protein kinase RIO2 92 191 - -
Spst1g02299 460 MobiDBLite consensus disorder prediction 356 460 - -
Spst1g02299 460 PANTHER SER/THR-PROTEIN KINASE RIO2 1 453 - -
Spst1g02299 460 FunFam Serine/threonine-protein kinase rio2 192 339 - -
Spst1g02299 460 Pfam Rio2, N-terminal 8 89 IPR015285 GO:0004674|GO:0005524|GO:0006468
Spst1g02299 460 Gene3D Transferase(Phosphotransferase) domain 1 192 339 - -
Spst1g02299 460 SMART rio_2 64 288 IPR000687 GO:0004674|GO:0005524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02299 K07179 - gmx:100789490 808.905