Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02298 ATGGAGAAAGCAAGCACTAAATCTGCTTTGAAGTTTGTGAAGAACACTTCTCAGTCTGCAGCTCAATGGAGCAGTACTAATTCTAGAGGAATGACAAAAGATGTGCTCAAAGACAAGTTCTATGACAAGACTAAAGCTTCAAGAAGGTCTCCGCCCAAAGAAAGTAACATGGCTCCACCAAAGTCTCCACCAAGGTCTCCACCAAAAGAAAACACTAAGCCACAAGAATTCAAACTCCACACCCAAGAAAGAGCTGTCAAGCGTGCAATGTTCAATTATGCTGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAACAAGAGGAGAGGCTGCAAAAGTTGATTGAAGAGGAAGAGGTTCGTTTGCTAAGAAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTCTCCACAAAGATCAAGCAGGAGTGTCCCAAGAGAATCATGCATCCACATGATGAGCAGCAAGTGCTGGAGCTGCAGTGTTGGCAATGAAATTTACAGCTTGCACCACTATGGTCACCATGCTCTCAAAGCCATTAAGTAG 567 0.425 MEKASTKSALKFVKNTSQSAAQWSSTNSRGMTKDVLKDKFYDKTKASRRSPPKESNMAPPKSPPRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEERLQKLIEEEEVRLLRKEMVPRAQLMPYFDKPFSPQRSSRSVPRESCIHMMSSKCWSCSVGNEIYSLHHYGHHALKAIK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02298 188 PANTHER TARGETING PROTEIN FOR XKLP2 22 161 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Spst1g02298 188 MobiDBLite consensus disorder prediction 32 50 - -
Spst1g02298 188 Pfam Targeting protein for Xklp2 (TPX2) domain 77 149 IPR027329 -
Spst1g02298 188 MobiDBLite consensus disorder prediction 1 80 - -
Spst1g02298 188 Coils Coil 102 122 - -
Spst1g02298 188 MobiDBLite consensus disorder prediction 9 31 - -
Spst1g02298 188 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02298 Spst-Chr1 31688065 31690648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02298 - - gmx:100305850 325.479