Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02283 ATGGGGTTTGGTTTGTTAGCTTCGAAGGCAGTCAGACCCGCCTCGAGGCTCCTCCTCTCTTCCAAAAACCCCACCATCTTCCTCCGAACCATCGTCTCCAAGCCTCCGCTTTGCAATCCCGAGGCTTCCGCCGCGCAGCCGGAGCAGCCGCCACCCGCCGATCTTCCTCCCCGGACTCCGCTCGCCGGTGCGCGCGTCCATTTCGCGAACCCCGACGATGCCATCGAGGTCTTCGTGGACGGTTACCCCGTCAAAATCCCCAAGGGAATGACCGTTCTACAGGCGTGCGAGGTCGCTGGCGTCGACATCCCGCGGTTCTGCTACCACAGCAGACTCTCCATCGCTGGCAATTGCCGCATGTGCCTCGTCGAGGTTGAGAAATCGCCCAAACCTGTCGCCTCTTGCGCCATGCCCGCTCTTCCTGGGATGAAAATTAAGACTGATACACCTGTGGCAAAGAAGGCTCGAGAGGGGGTGATGGAGTTTTTATTGATGAATCACCCATTAGATTGCCCAATTTGTGATCAGGGTGGGGAATGTGATCTTCAGGATCAGTCTATGGCATTTGGCTCTGATCGAGGGCGGTTTACTGAAGTGAAGAGATCTGTGGTAGATAAAAATCTTGGACCTCTGGTGAAGACTGACTCTGGTGGATTATTTCTTTCTTCAAACAGGTGTGTTAGATTTGCAACTGAGGTTGCTGGGGTTCAGGATCTTGGCATGTTAGGTCGTGGTAGTGGAGAAGAGATTGGGACATATGTTGAAAAACTTTTGACAAGTGAGCTTTCTGGAAATGTCATAGATATCTGTCCTGTGGGAGCTCTCACTTCAAAACCGTTTGCATTTAAAGCCCGAAATTGGGAGTTGAAGGGCACAGAGACCATTGATGTTACTGATGCTGTTGGCTCCAATATTAGAATTGATAGCAGAGGACCTGAAGTGATGCGCATTGTTCCTCGTTTAAATGAGGTTAGGTTTTCTCATGGAAAGGATATAAATGAAGAATGGATTTCAGACAAAACCCGCTTCTGTTATGATGGTTTGAAAAGGCAGAGGTTAAATGACCCCATGATTCGAGGTCCTGATGGACGATTTAAGGCTGTTAACTGGCGTGATGCCCTTGCTGTGGTTGCAGAGATTGCCCATCAAGTTAAACCAGAAGAAATTGTTGGAATAGCTGGAAAACTTTCTGATGCTGAGTCCATGATTGCGCTAAAAGATTTCTTAAATAGGATGGGGTCAAATGATGTATGGGGTGAAGGCATTGGTGTAAATACTAATGCTGATTTCAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAAAAAGCGGATGTGTTCCTGTTGGTTGGTACACAGCCACGGGTGGAAGCTGCTATGGTTAATGCCAGAATACGCAAGACTGTCAGATCAAACCAAGCCAAAGTTGGGTACGTTGGGCCTGCTACTGATTTTAACTATGACCACAAACATCTTGGTACTGACCCTCAAACACTTGTTGAAATTGCTGAGGGTCGCCACCCATTTTTCAAGACACTCTCTGTGGCCAAAAACCCTGTTATCATTGTTGGTGCTGGTGTTTTTGAGAGGAAGGACCAGGATGCAATTTTTGCCGCTGTTGAAACCATTGCACAAAAAGCAAATGTTGTCAGACCTGACTGGAATGGCCTTAATGTACTGCTTCTCCATGCCGCCCAGGCTGCTGCACTTGACCTTGGACTTGTTCCGCAATCTGAGAAAAGCCTCGAGTCTGCAAAATTTGTATATTTGATGGGTGCTGATGATGTGAACCTAGACAAGATCCCAGATGATGCTTTTGTTGTTTATCAAGGTCACCATGGTGACAAGAGTGTTTATCGTGCAAATGTTATTTTGCCAACGGCAGCATTCAGTGAGAAGGAAGGGACCTATGAAAATACCGAAGGATGCACGCAACAAACATTGCCTGCAGTTCCAACAGTTGGTGACTCCAGAGATGATTGGAAAATAATTCGAGCTCTGTCTGAGGTGGCAGGTGTGCGTTTGCCCTATGATACAATTGGTGCTGTTCGTGCCCGAATCAGGAATGTAGCCCCAAACCTTGTGAATGTGGATGAGAGAGAGCCAGCTACATTGCCGTCTTCCCTGAGACCAACCTTCACTGAGAAGGTTGACACAACTCCATTCGGGGCTGTAGTTGAGAATTTCTATATGACTGACGCCATAACCAGGGCATCAAAGATCATGGCACAATGTAGTGCTATGCTGTTGAAAAAGTGA 2265 0.4755 MGFGLLASKAVRPASRLLLSSKNPTIFLRTIVSKPPLCNPEASAAQPEQPPPADLPPRTPLAGARVHFANPDDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNLGPLVKTDSGGLFLSSNRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLLTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEVRFSHGKDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKAVNWRDALAVVAEIAHQVKPEEIVGIAGKLSDAESMIALKDFLNRMGSNDVWGEGIGVNTNADFRSGYIMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIRKTVRSNQAKVGYVGPATDFNYDHKHLGTDPQTLVEIAEGRHPFFKTLSVAKNPVIIVGAGVFERKDQDAIFAAVETIAQKANVVRPDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDVNLDKIPDDAFVVYQGHHGDKSVYRANVILPTAAFSEKEGTYENTEGCTQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGAVRARIRNVAPNLVNVDEREPATLPSSLRPTFTEKVDTTPFGAVVENFYMTDAITRASKIMAQCSAMLLKK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02283 754 FunFam NADH dehydrogenase [ubiquinone] iron-sulfur protein 1 mitochondrial 579 704 - -
Spst1g02283 754 FunFam NADH-quinone oxidoreductase 361 422 - -
Spst1g02283 754 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 151 190 IPR019574 GO:0016491
Spst1g02283 754 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 156 193 IPR019574 GO:0016491
Spst1g02283 754 NCBIfam NADH-quinone oxidoreductase subunit NuoG 77 669 IPR010228 GO:0016651|GO:0051536
Spst1g02283 754 Pfam Molybdopterin oxidoreductase 352 671 IPR006656 GO:0016491
Spst1g02283 754 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 73 151 IPR001041 GO:0051536
Spst1g02283 754 MobiDBLite consensus disorder prediction 39 61 - -
Spst1g02283 754 FunFam NADH-ubiquinone oxidoreductase 75 kDa subunit 200 278 - -
Spst1g02283 754 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 104 121 IPR000283 GO:0008137|GO:0016020|GO:0042773
Spst1g02283 754 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 717 747 IPR015405 GO:0016651|GO:0051536
Spst1g02283 754 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 287 701 - -
Spst1g02283 754 CDD MopB_Res-Cmplx1_Nad11 293 673 - -
Spst1g02283 754 Gene3D - 74 196 - -
Spst1g02283 754 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 171 183 IPR000283 GO:0008137|GO:0016020|GO:0042773
Spst1g02283 754 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 289 352 IPR006963 GO:0016491
Spst1g02283 754 Pfam 2Fe-2S iron-sulfur cluster binding domain 73 150 - -
Spst1g02283 754 SMART NADH_G_4Fe_4S_3_2 156 196 IPR019574 GO:0016491
Spst1g02283 754 SUPERFAMILY 2Fe-2S ferredoxin-like 75 196 IPR036010 GO:0051536
Spst1g02283 754 Gene3D - 587 704 - -
Spst1g02283 754 FunFam NADH-quinone oxidoreductase subunit G 74 196 - -
Spst1g02283 754 CDD fer2 75 146 IPR001041 GO:0051536
Spst1g02283 754 PANTHER RESPIRATORY NITRATE REDUCTASE 144 749 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02283 K03934 - gmx:100776683 1360.9