Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02276 ATGGAGGAGAACGGCACAGAGGAAGCGAAGCTATTGATGCTGAAAATTGCGGCGATACTCGACGAGGCTCGAACCTCATACGCCACGCACAACCGAAAGCTCAAGGAACTGTCACTCCTCCGATCCAAGTCCTCTTCACTTTCTCATTTTTTCTCCGCCTTCTCCAAAACCCTAACTCCTCTCTTCGACTTCCAGAGGCGCCTCGCCTCCGCCGACCGCGTCGTCTCATTTGTCTCCGCCTTCGCCTCTGCTGCCTCCGACGAGTTCCTCGACCACTTCCTCAAGTTCCTCCTTGCTGCCGCCACGGCATCCAACAAAACGGCCAGATTCCGAGCCTGCCAGATAGTCTCCGAGATTATATTGCGGCTTCCAGATGACGCAGAAGTGAGCAATGAGCTATGGGATGAGGTGATAGAGTGGATGATGGTGAGGGTACGAGACAAGATCCCTGTGGTGCGTACTTTTGCGGTTAGAGCGCTTTCACGCTTTGTGAATGACTCTGTTAATAGTGACATCCTTGATCTGTTACTCGAGGTGCTTCCTTTGGAACAGAATGCGGATGTTCGGAAGATGATTATGCTATCTTTGCCACCTTCTACGGCAACCTCTCAAGTTATCATTGATTGTACCTTGGATGTGAGTGAAACTGTACGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAACTCAGGACAGTAATCCTTCGGAGAGGACTTGCTGACCGATCTGTTGCTGTCTCAAGGGAATGTTTTAAACTATTGAAAGATGAATGGCTTGCGAAGTGTTGTAATGGTGATCCTTTAAAACTACTGAAATATCTTGATGTTGAAACTTATGAATCAGTTAGTGAGTCTGTCATGGAGGCCCTTCTTAAAGCTGGTTTAGTAAAAATACAAAATGGTGCAAGTATCCAGCAGTGCATATCGTCAAATGGTGACAGGATAGAAGGAGACTCGGTTTATTGCCCACCAAGCATTCAGCTGATGGAAGCAGAGGCTGCTCTTTATTGGAGGACTGTTTGCCAGCATTTACAGTCAGAAGCGCACGCAAAAGGTTCTGATGCTGCAGCAACAACGGGCACTGAAGCAGAAGTATATGCAGCAGAAGCATCAGATAAAAATGACCTTCTTGAAAAAATTCTTCCCACTACAGTTAGTGAATATATTGAATTGGTCAGAGCTCATACAAATGCCGGATCAAACCATCGCTTTGCTAGTCGGCAATTGCTTTTGCTCGGTGCAATGTTTGATTTTTCCGATGCTTCAAATAGAAAGGCTGCTGGTGCATTTCTGCATGAGCTTATATGCAAGTTTCCTGAGCATGAGGATGATGATGAAGGGAATATAGTTGTTCTTGGAGATGGATTAAGTTTTGGTGGAGACAATGATTGGGCTGAAGCTGTAGCCAGTTTCGCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAGGTTGTTCTTGCAATCATTGAAGAGCTCGCCCAACCTTGCAAGGAAAGAACAGCAAATCATGTGCAGTGGATGCACACTCTCTCTCTAACTGGCCTTTTGCTAAAAAATGCAAAATCACTACGAGTACTTCGGGGCAAGGCTATTGAACCAGATGAGCTACTCCAAACCTTACTACTTCCTGGGACGAAACAATCTCACTTGGATGTGCAAAGGATTGCAGTCAGATGCCTTGGCCTTTTTGGCCTTTTGGAAAGGAAACCAAGTGCAGAGCTTTTGAAACAGTTGAGGATTTCATACATTAAGGGGCCACATTCAATCAGTATAGAGGCTTGTAAGGCATTAATTGATCTTGTGATGTGGTATGGTCCTCACGAAGTTGACAAGGTGTTAGAGCTCAATATTCCAGGCCTAAACAGTGAGAAAACGACCTTTTGTCCTGTGAACTTCTCTGATTCAGAGGAGGTTTTAGATGTTGAGACGCTTGATATCTTATATGGAGGCTTTGAAATTGATGATTGGGCGAGTCCTTTACCTACCAACGAAGATGAGTGCGTGCATGCTATACTTGGAGAAGGGTTTGCGAAGATTCTTCTCCTTAGTGACAATTATCCAAGTTTACCGGTCTCCTTGCATCCTGTTATTTTATCAAAGCTCCTTTACTTGCATTTCAGTGACGTGTCGGAACACTTGCACAGGTGA 2175 0.451 MEENGTEEAKLLMLKIAAILDEARTSYATHNRKLKELSLLRSKSSSLSHFFSAFSKTLTPLFDFQRRLASADRVVSFVSAFASAASDEFLDHFLKFLLAAATASNKTARFRACQIVSEIILRLPDDAEVSNELWDEVIEWMMVRVRDKIPVVRTFAVRALSRFVNDSVNSDILDLLLEVLPLEQNADVRKMIMLSLPPSTATSQVIIDCTLDVSETVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRSVAVSRECFKLLKDEWLAKCCNGDPLKLLKYLDVETYESVSESVMEALLKAGLVKIQNGASIQQCISSNGDRIEGDSVYCPPSIQLMEAEAALYWRTVCQHLQSEAHAKGSDAAATTGTEAEVYAAEASDKNDLLEKILPTTVSEYIELVRAHTNAGSNHRFASRQLLLLGAMFDFSDASNRKAAGAFLHELICKFPEHEDDDEGNIVVLGDGLSFGGDNDWAEAVASFARKVHAAPGEFEEVVLAIIEELAQPCKERTANHVQWMHTLSLTGLLLKNAKSLRVLRGKAIEPDELLQTLLLPGTKQSHLDVQRIAVRCLGLFGLLERKPSAELLKQLRISYIKGPHSISIEACKALIDLVMWYGPHEVDKVLELNIPGLNSEKTTFCPVNFSDSEEVLDVETLDILYGGFEIDDWASPLPTNEDECVHAILGEGFAKILLLSDNYPSLPVSLHPVILSKLLYLHFSDVSEHLHR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02276 724 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 3 724 IPR027165 GO:0000796|GO:0007076
Spst1g02276 724 SUPERFAMILY ARM repeat 73 632 IPR016024 -
Spst1g02276 724 Pfam Nuclear condensing complex subunits, C-term domain 518 723 IPR025977 -
Spst1g02276 724 Gene3D - 56 241 IPR011989 -
Spst1g02276 724 FunFam ARM repeat superfamily protein 63 239 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02276 K06678 - gmx:100817677 1223.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02276 1 31516875 31522183 Spst1g02276 1 31516875 31522183 ECH